openvax / topiary

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master: 90%

LAST BUILD ON BRANCH v4.3.1

branch: v4.3.1

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• v4.3.1
• add-agents-md
• add-cache-sharding
• add-cached-predictor
• add-model-colon-kind-syntax
• add-netmhc-cache-loaders
• add-protected-tissues-scope
• add-self-proteome-nearest
• antigen-fragment
• bare-ident-brackets
• best-allele-aggregation
• cached-predictor-cli
• cached-predictor-vaxrank-polish
• chore/varcode-floor-122
• ci-caching
• cleanup-dsl-version-syntax
• codex/mhctools-3-7-compat
• codex/predict-wt-peptides
• combine-predictor-results
• csv-fasta-inputs
• dsl-extensions
• dsl-polish
• dsl-polish-v5.0.1
• dsl-refactor-v5
• eval-context-default-methods
• evaluate-scores-helper
• expression-data
• expression-dsl-v2
• feature/peptide-property-dsl
• filter-auto-aggregate
• fix-127-autowrap-test
• fix-165-backfill-value-from-score
• fix-biopython-dependency
• fix-deploy-python-selection
• improve-cli-errors
• inline-blosum62
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• master
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• plumb-kind-support
• pr-b-fragment-refactor
• promote-kind-aliases-public
• pvacseq-loader
• refactor-for-protein-sequences
• release-4.8.0
• restore-varcode-cli-parser-delegation
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Build # 24166461945

Build Type

push

github

Committed by iskandr

Commit Message

Update README with comprehensive documentation, bump to 4.3.1

Rewrote README to cover all current capabilities: direct sequence/peptide
inputs (CSV, FASTA), Ensembl gene lookups, CTA gene sets, tissue exclusion,
composable filter/ranking expressions, and the Python API.

Coverage Stats

1 of 1 new or added line in 1 file covered. (100.0%)

1090 of 1259 relevant lines covered (86.58%)

2.6 hits per line