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hammerlab / isovar
88%
master: 89%

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LAST BUILD BRANCH: v0.7.0
DEFAULT BRANCH: master
Repo Added 06 Apr 2016 07:13PM UTC
Files 30
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LAST BUILD ON BRANCH trim-variant-sequences-by-coverage-while-matching-to-reference
branch: trim-variant-sequences-by-coverage-while-matching-to-reference
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  • trim-variant-sequences-by-coverage-while-matching-to-reference
  • add-min-alt-rna-reads-cli-arg
  • cli
  • compute-mutated-offset-correctly
  • count-all-alleles-at-locus
  • death-to-namedtuples
  • expose-flag-to-filter-mismatches-after-variant
  • filter-mismatches-after-variant
  • fix-assembly-and-add-min-alt-rna-reads
  • fix-transcript-biotypes
  • fix-variant-reading-into-intron
  • increment-version
  • isovar-logger
  • isovar-up-version
  • less-noisy-logging
  • master
  • refactor-translation-module
  • remove-soft-clipped-bases
  • renamed-args-to-cli-for-consistency
  • revert-37-add-gene-column-to-dataframes
  • sbkio-0-4-2
  • small-fixes-to-tests-and-args
  • the-worst-bug
  • trim-N-from-read-sequence
  • use-assembly-and-trimming
  • use-varcode-cli-for-loading-variants
  • v0.0.2
  • v0.0.3
  • v0.1.0
  • v0.5.1
  • v0.7.0
  • variant-sequence-combine-return-none

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travis-ci

iskandr
python2 doesn't like self= argument to __init__

1072 of 1220 relevant lines covered (87.87%)

1.75 hits per line

Relevant lines Covered
Build:
Build:
1220 RELEVANT LINES 1072 COVERED LINES
1.75 HITS PER LINE
Source Files on trim-variant-sequences-by-coverage-while-matching-to-reference
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  • List 0
  • Changed 6
  • Source Changed 4
  • Coverage Changed 4
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
369 trim-variant-sequences-by-coverage-while-matching-to-reference python2 doesn't like self= argument to __init__ push 17 Nov 2016 11:07PM UTC iskandr travis-ci pending completion  
367 trim-variant-sequences-by-coverage-while-matching-to-reference added TODO comment push 17 Nov 2016 10:43PM UTC iskandr travis-ci pending completion  
365 trim-variant-sequences-by-coverage-while-matching-to-reference got rid of extra properties on ReferenceSequenceKey push 17 Nov 2016 09:51PM UTC iskandr travis-ci pending completion  
363 trim-variant-sequences-by-coverage-while-matching-to-reference got rid of extra properties on ReferenceSequenceKey push 17 Nov 2016 09:37PM UTC iskandr travis-ci pending completion  
361 trim-variant-sequences-by-coverage-while-matching-to-reference changed AlleleRead to use CompactObject push 17 Nov 2016 09:27PM UTC iskandr travis-ci pending completion  
360 trim-variant-sequences-by-coverage-while-matching-to-reference renamed max_attempts to max_trimming_attempts push 17 Nov 2016 09:15PM UTC iskandr travis-ci pending completion  
357 trim-variant-sequences-by-coverage-while-matching-to-reference testing read properties more explicitly push 17 Nov 2016 08:37PM UTC iskandr travis-ci pending completion  
355 trim-variant-sequences-by-coverage-while-matching-to-reference changed max_attempts from 5 to 3 push 17 Nov 2016 08:18PM UTC iskandr travis-ci pending completion  
353 trim-variant-sequences-by-coverage-while-matching-to-reference simplified CompactObject, got rid of need for __str__ implementations and made _fields a class member push 17 Nov 2016 07:59PM UTC iskandr travis-ci pending completion  
351 trim-variant-sequences-by-coverage-while-matching-to-reference fixed transcript prefix length check push 17 Nov 2016 01:38AM UTC iskandr travis-ci pending completion  
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  • Repo on GitHub
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