• Home
  • Features
  • Pricing
  • Docs
  • Announcements
  • Sign In

griffithlab / pVACtools
83%
master: 86%

Build:
Build:
LAST BUILD BRANCH: mixmhcpred
DEFAULT BRANCH: master
Repo Added 25 Jul 2019 03:00PM UTC
Files 159
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst

LAST BUILD ON BRANCH frameshift
branch: frameshift
CHANGE BRANCH
x
Reset
  • frameshift
  • 1.5.14
  • MHC_Class_File_Renaming
  • Prioritize_IC50_Or_Percentile
  • add_pvacview_citation
  • additional-filtering
  • agfusion
  • aggregate_allele_counts
  • aggregate_inclusion_count_limit_bugfix
  • aggregate_na
  • aggregate_percentile
  • aggregate_report
  • anchor_types
  • blast
  • blast_hotfix
  • cmd_description
  • compare_input_fix
  • conda
  • contribute
  • coveralls
  • coveralls2
  • csq_proximal
  • dependabot/pip/docs/setuptools-78.1.1
  • docs
  • epitope_length
  • epitope_length2
  • export_header_row
  • figure
  • filter_docs
  • fix-pvacsplice-help
  • fix_pvacvector_tmp_file_removal
  • gene_of_interest
  • github_ci
  • gt_docs
  • gt_error
  • hotfix
  • hotfix_pvacbind
  • hotfix_vaxrank
  • ic50-sorting
  • iedb
  • incomplete-cds-filter
  • index
  • inframe_del
  • insertion_fasta
  • issue-1138
  • issue-1298
  • issue-457
  • issue_1225
  • issue_1236
  • issue_1274
  • issue_1275
  • issue_1276_2
  • issue_1284
  • issue_1311
  • issues/1142
  • issues/1176
  • issues/1187
  • license
  • malachi-docs-fix-depname
  • master
  • matching
  • merge-scripts
  • mhcflurry
  • mhcflurry_calls
  • mixmhcpred
  • mouse
  • mutation_position
  • na
  • netchop_stab
  • netmhciipan_version
  • no_aa_change
  • normal_sample
  • ordering_bugfix
  • pVACcompare_integration
  • pVACvector-biotype-fix
  • peptide_length
  • percentile
  • percentile_filter
  • percentile_none
  • permissions
  • proximal_generate_fasta
  • pvacfuse
  • pvacfuse_hotfix
  • pvacfuse_sorting
  • pvacfuse_speedup
  • pvacplice_anchor_input
  • pvacsplice_addNonHumanUnittest
  • pvacsplice_aggregate_report
  • pvacsplice_bugfix
  • pvacsplice_frameshift
  • pvacsplice_generate_protein_fasta
  • pvacsplice_include_nonhumanEnsemblTranscript
  • pvacsplice_troubleshoot_issue1223
  • pvacsplice_troubleshoot_proteinfasta
  • pvacsplice_unsupported_aas
  • pvacvector
  • pvacvector_args
  • pvacvector_bug
  • pvacvector_bugfix
  • pvacvector_clipping
  • pvacvector_hotfix
  • pvacvector_params
  • pvacview_bugfix
  • pvacview_help
  • pvacview_incl_best_peptide
  • pvacview_index
  • pvafuse_error
  • py38
  • python_version
  • raise
  • read_support
  • ref_match
  • ref_prot
  • ref_prot_missing_sequence
  • remove_condensed
  • remove_integrate_neo
  • revert-659-remove_integrate_neo
  • rtd
  • selected_junctions
  • speedup
  • staging
  • tensorflow
  • test_bug
  • test_coverage
  • test_optimization
  • tier_docs
  • top_score_metric2
  • travis_hotfix
  • unsupported_aas
  • v1.5.10
  • v1.5.11
  • v1.5.12
  • v1.5.13
  • v1.5.14
  • v1.5.6
  • v1.5.7
  • v1.5.8
  • v1.5.9
  • v2.0.0
  • v2.0.1
  • v2.0.2
  • valid_alleles_species
  • vaxrank
  • vector-biotype-fix
  • vep

pending completion
1730

push

travis-ci

susannasiebert
Use uppercase Index column (from final report) for generate protein fasta commands

4262 of 5159 relevant lines covered (82.61%)

2.48 hits per line

Relevant lines Covered
Build:
Build:
5159 RELEVANT LINES 4262 COVERED LINES
2.48 HITS PER LINE
Source Files on frameshift
  • Tree
  • List 72
  • Changed 12
  • Source Changed 11
  • Coverage Changed 8
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
1730 frameshift Use uppercase Index column (from final report) for generate protein fasta commands push 26 Jan 2021 06:48PM UTC susannasiebert travis-ci pending completion  
1720 frameshift Merge 31e22765b into fc0d62a22 Pull #634 15 Jan 2021 03:37PM UTC web-flow travis-ci pending completion  
1719 frameshift Update convenience command that installs VEP plugins to also install the Frameshift plugin push 15 Jan 2021 03:33PM UTC susannasiebert travis-ci pending completion  
1718 frameshift Update convenience command that installs VEP plugins to also install the Frameshift plugin push 14 Jan 2021 06:50PM UTC susannasiebert travis-ci pending completion  
See All Builds (1412)
  • Repo on GitHub
STATUS · Troubleshooting · Open an Issue · Sales · Support · CAREERS · ENTERPRISE · START FREE · SCHEDULE DEMO
ANNOUNCEMENTS · TWITTER · TOS & SLA · Supported CI Services · What's a CI service? · Automated Testing

© 2025 Coveralls, Inc