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griffithlab / pVACtools
86%
master: 86%

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LAST BUILD BRANCH: mixmhcpred
DEFAULT BRANCH: master
Repo Added 25 Jul 2019 03:00PM UTC
Files 159
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LAST BUILD ON BRANCH agfusion
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  • agfusion
  • 1.5.14
  • MHC_Class_File_Renaming
  • Prioritize_IC50_Or_Percentile
  • add_pvacview_citation
  • additional-filtering
  • aggregate_allele_counts
  • aggregate_inclusion_count_limit_bugfix
  • aggregate_na
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  • conda
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  • coveralls
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  • csq_proximal
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  • docs
  • epitope_length
  • epitope_length2
  • export_header_row
  • figure
  • filter_docs
  • fix-pvacsplice-help
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  • frameshift
  • gene_of_interest
  • github_ci
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  • hotfix
  • hotfix_pvacbind
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  • ic50-sorting
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  • index
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  • issue-1138
  • issue-1298
  • issue-457
  • issue_1225
  • issue_1236
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  • license
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  • master
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  • mutation_position
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  • pVACcompare_integration
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  • peptide_length
  • percentile
  • percentile_filter
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  • proximal_generate_fasta
  • pvacfuse
  • pvacfuse_hotfix
  • pvacfuse_sorting
  • pvacfuse_speedup
  • pvacplice_anchor_input
  • pvacsplice_addNonHumanUnittest
  • pvacsplice_aggregate_report
  • pvacsplice_bugfix
  • pvacsplice_frameshift
  • pvacsplice_generate_protein_fasta
  • pvacsplice_include_nonhumanEnsemblTranscript
  • pvacsplice_troubleshoot_issue1223
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  • pvacsplice_unsupported_aas
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  • pvacvector_args
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  • pvacvector_clipping
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  • pvacview_bugfix
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  • pvafuse_error
  • py38
  • python_version
  • raise
  • read_support
  • ref_match
  • ref_prot
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  • remove_condensed
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  • rtd
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  • tensorflow
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  • tier_docs
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  • v1.5.10
  • v1.5.11
  • v1.5.12
  • v1.5.13
  • v1.5.14
  • v1.5.6
  • v1.5.7
  • v1.5.8
  • v1.5.9
  • v2.0.0
  • v2.0.1
  • v2.0.2
  • valid_alleles_species
  • vaxrank
  • vector-biotype-fix
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pending completion
1502

Pull #533

travis-ci

web-flow
Check that AGFusion .exons.txt file exists, otherwise use .exons.csv file

The exons file ending was updated to .csv in version 1.251 (commit
https://github.com/murphycj/AGFusion/commit/9afac87da).
This change allows for compatibility with all current AGFusion versions.
Pull Request #533: Check that AGFusion .exons.txt file exists, otherwise use .exons.csv file

2 of 2 new or added lines in 1 file covered. (100.0%)

4114 of 4809 relevant lines covered (85.55%)

2.57 hits per line

Relevant lines Covered
Build:
Build:
4809 RELEVANT LINES 4114 COVERED LINES
2.57 HITS PER LINE
Source Files on agfusion
  • List 0
  • Changed 2
  • Source Changed 1
  • Coverage Changed 2
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
1502 agfusion Check that AGFusion .exons.txt file exists, otherwise use .exons.csv file The exons file ending was updated to .csv in version 1.251 (commit https://github.com/murphycj/AGFusion/commit/9afac87da). This change allows... Pull #533 27 Mar 2020 04:06PM UTC web-flow travis-ci pending completion  
1501 agfusion Check that AGFusion .exons.txt file exists, otherwise use .exons.csv file The exons file ending was updated to .csv in version 1.251 (commit https://github.com/murphycj/AGFusion/commit/9afac87da). This change allows... push 27 Mar 2020 03:28PM UTC susannasiebert travis-ci pending completion  
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