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griffithlab / pVACtools
84%
master: 86%

Build:
Build:
LAST BUILD BRANCH: mixmhcpred
DEFAULT BRANCH: master
Repo Added 25 Jul 2019 03:00PM UTC
Files 159
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LAST BUILD ON BRANCH staging
branch: staging
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  • staging
  • 1.5.14
  • MHC_Class_File_Renaming
  • Prioritize_IC50_Or_Percentile
  • add_pvacview_citation
  • additional-filtering
  • agfusion
  • aggregate_allele_counts
  • aggregate_inclusion_count_limit_bugfix
  • aggregate_na
  • aggregate_percentile
  • aggregate_report
  • anchor_types
  • blast
  • blast_hotfix
  • cmd_description
  • compare_input_fix
  • conda
  • contribute
  • coveralls
  • coveralls2
  • csq_proximal
  • dependabot/pip/docs/setuptools-78.1.1
  • docs
  • epitope_length
  • epitope_length2
  • export_header_row
  • figure
  • filter_docs
  • fix-pvacsplice-help
  • fix_pvacvector_tmp_file_removal
  • frameshift
  • gene_of_interest
  • github_ci
  • gt_docs
  • gt_error
  • hotfix
  • hotfix_pvacbind
  • hotfix_vaxrank
  • ic50-sorting
  • iedb
  • incomplete-cds-filter
  • index
  • inframe_del
  • insertion_fasta
  • issue-1138
  • issue-1298
  • issue-457
  • issue_1225
  • issue_1236
  • issue_1274
  • issue_1275
  • issue_1276_2
  • issue_1284
  • issue_1311
  • issues/1142
  • issues/1176
  • issues/1187
  • license
  • malachi-docs-fix-depname
  • master
  • matching
  • merge-scripts
  • mhcflurry
  • mhcflurry_calls
  • mixmhcpred
  • mouse
  • mutation_position
  • na
  • netchop_stab
  • netmhciipan_version
  • no_aa_change
  • normal_sample
  • ordering_bugfix
  • pVACcompare_integration
  • pVACvector-biotype-fix
  • peptide_length
  • percentile
  • percentile_filter
  • percentile_none
  • permissions
  • proximal_generate_fasta
  • pvacfuse
  • pvacfuse_hotfix
  • pvacfuse_sorting
  • pvacfuse_speedup
  • pvacplice_anchor_input
  • pvacsplice_addNonHumanUnittest
  • pvacsplice_aggregate_report
  • pvacsplice_bugfix
  • pvacsplice_frameshift
  • pvacsplice_generate_protein_fasta
  • pvacsplice_include_nonhumanEnsemblTranscript
  • pvacsplice_troubleshoot_issue1223
  • pvacsplice_troubleshoot_proteinfasta
  • pvacsplice_unsupported_aas
  • pvacvector
  • pvacvector_args
  • pvacvector_bug
  • pvacvector_bugfix
  • pvacvector_clipping
  • pvacvector_hotfix
  • pvacvector_params
  • pvacview_bugfix
  • pvacview_help
  • pvacview_incl_best_peptide
  • pvacview_index
  • pvafuse_error
  • py38
  • python_version
  • raise
  • read_support
  • ref_match
  • ref_prot
  • ref_prot_missing_sequence
  • remove_condensed
  • remove_integrate_neo
  • revert-659-remove_integrate_neo
  • rtd
  • selected_junctions
  • speedup
  • tensorflow
  • test_bug
  • test_coverage
  • test_optimization
  • tier_docs
  • top_score_metric2
  • travis_hotfix
  • unsupported_aas
  • v1.5.10
  • v1.5.11
  • v1.5.12
  • v1.5.13
  • v1.5.14
  • v1.5.6
  • v1.5.7
  • v1.5.8
  • v1.5.9
  • v2.0.0
  • v2.0.1
  • v2.0.2
  • valid_alleles_species
  • vaxrank
  • vector-biotype-fix
  • vep

24 Sep 2025 06:03PM UTC coverage: 83.548% (+0.09%) from 83.462%
17985359498

push

github

susannasiebert
Merge remote-tracking branch 'origin/master' into staging

19 of 23 new or added lines in 3 files covered. (82.61%)

1 existing line in 1 file now uncovered.

9004 of 10777 relevant lines covered (83.55%)

0.84 hits per line

Relevant lines Covered
Build:
Build:
10777 RELEVANT LINES 9004 COVERED LINES
0.84 HITS PER LINE
Source Files on staging
  • Tree
  • List 159
  • Changed 3
  • Source Changed 0
  • Coverage Changed 3
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
17985359498 staging Merge remote-tracking branch 'origin/master' into staging push 24 Sep 2025 07:30PM UTC susannasiebert github
83.55
17922717500 staging Merge pull request #1310 from griffithlab/pvacfuse_sorting Fix pVACfuse sorting push 22 Sep 2025 06:33PM UTC web-flow github
83.46
17679409758 staging Merge pull request #1306 from griffithlab/test_optimization Move predictor tests to separate GitHub action push 12 Sep 2025 05:12PM UTC web-flow github
83.46
17653193200 staging Merge pull request #1209 from griffithlab/python_version Cease support for python 3.7 and 3.8 push 11 Sep 2025 07:37PM UTC web-flow github
84.65
17649508757 staging Merge remote-tracking branch 'origin/master' into staging push 11 Sep 2025 05:25PM UTC susannasiebert github
84.74
17648637539 staging Merge pull request #1302 from ldhtnp/merge-scripts Updated create_peptide_ordering_form parameter help text push 11 Sep 2025 04:33PM UTC web-flow github
84.66
17556230231 staging Merge pull request #1299 from ldhtnp/compare_input_fix Fixed input yml parsing push 08 Sep 2025 05:14PM UTC web-flow github
84.74
17556181423 staging Merge pull request #1300 from ldhtnp/merge-scripts Added annotated neoantigen candidates excel file to ordering form output push 08 Sep 2025 05:10PM UTC web-flow github
84.46
17276885996 staging Merge pull request #1252 from Jaz2021/MHC_Class_File_Renaming Main report file names given MHC_I/MHC_II/Combined Prefix (Issue #1221) push 27 Aug 2025 09:09PM UTC web-flow github
84.66
17273562435 staging Merge pull request #1232 from griffithlab/pvacsplice_aggregate_report Update pVACsplice aggregation logic to aggregate by Junction instead of Index push 27 Aug 2025 06:38PM UTC web-flow github
84.71
See All Builds (1412)
  • Repo on GitHub
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