• Home
  • Features
  • Pricing
  • Docs
  • Announcements
  • Sign In

broadinstitute / viral-core
69%
master: 69%

Build:
Build:
LAST BUILD BRANCH: v2.5.1
DEFAULT BRANCH: master
Repo Added 10 Sep 2019 08:19PM UTC
Files 24
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst

LAST BUILD ON BRANCH dp-conda-fix
branch: dp-conda-fix
CHANGE BRANCH
x
Reset
  • dp-conda-fix
  • ct-add-fgbio
  • ct-add-ncbi-datasets
  • ct-add-read-filtering-cli-cmd
  • ct-align_and_fix_without_supplementary_alignments
  • ct-barcode-helper-ntc-counting
  • ct-barcode-i5-single-index-bugfix
  • ct-bugfix-idxstats-fns
  • ct-bugfix-minimap2_idxstats
  • ct-bump-baseimage
  • ct-bump-baseimage-0.2.3
  • ct-bump-pysam
  • ct-bump-pytest
  • ct-bump-python-version
  • ct-bump-viral-baseimage-0.2.4
  • ct-gh-actions-jvm-heap-decrease
  • ct-ghactions-update-ubuntu
  • ct-github-actions
  • ct-help-text-correction
  • ct-option-to-include-dup-reads-in-filtering
  • ct-set-default-threads
  • ct-swiftseq-demux-integration
  • ct-update-baseimage
  • ct-update-docker-base
  • ct-update-docker-mem-calc
  • ct-update-testing
  • ct-version-read-fix
  • docs
  • dp-dev
  • dp-docs
  • dp-fasta-handling
  • dp-fix-fastqc
  • ll-add_swiftseq_demux
  • master
  • v2.2.0
  • v2.2.1
  • v2.2.3
  • v2.3.0
  • v2.3.1
  • v2.3.2
  • v2.3.3
  • v2.3.4
  • v2.3.5
  • v2.3.6
  • v2.4.0
  • v2.4.1
  • v2.4.2
  • v2.4.3
  • v2.5.0
  • v2.5.1

12 Nov 2025 02:16PM UTC coverage: 68.762% (-0.2%) from 68.971%
19300487268

Pull #126

github

dpark01
Remove -x flag from install script set command

The -x flag prints every command before execution, which creates
excessive output during builds. Keep -e and -o pipefail for error
handling.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
Pull Request #126: Fix conda dependency installation regression in v2.5.0

4059 of 5903 relevant lines covered (68.76%)

0.69 hits per line

Relevant lines Covered
Build:
Build:
5903 RELEVANT LINES 4059 COVERED LINES
0.69 HITS PER LINE
Source Files on dp-conda-fix
  • List 23
  • Changed 1
  • Source Changed 0
  • Coverage Changed 1
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
19300487268 dp-conda-fix Remove -x flag from install script set command The -x flag prints every command before execution, which creates excessive output during builds. Keep -e and -o pipefail for error handling. 🤖 Generated with [Claude Code](https://claude.com/claude-... Pull #126 12 Nov 2025 02:29PM UTC dpark01 github
68.76
19300489072 dp-conda-fix Merge 00e4927fa into a319d20e3 Pull #126 12 Nov 2025 02:29PM UTC web-flow github
68.97
19300364993 dp-conda-fix Merge 81933ca85 into a319d20e3 Pull #126 12 Nov 2025 02:25PM UTC web-flow github
68.95
19300357117 dp-conda-fix Fix conda dependency installation regression in v2.5.0 Restores incremental package installation behavior that was changed in v2.5.0, which broke downstream projects that depend on viral-core. Changes: - Dockerfile: Add `mamba create` step to cr... push 12 Nov 2025 02:25PM UTC dpark01 github
68.78
See All Builds (302)
  • Repo on GitHub
STATUS · Troubleshooting · Open an Issue · Sales · Support · CAREERS · ENTERPRISE · START FREE · SCHEDULE DEMO
ANNOUNCEMENTS · TWITTER · TOS & SLA · Supported CI Services · What's a CI service? · Automated Testing

© 2025 Coveralls, Inc