broadinstitute / viral-core
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master: 66%

LAST BUILD BRANCH: v2.4.3
DEFAULT BRANCH: master
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LAST BUILD ON BRANCH ct-swiftseq-demux-integration
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coverage: 58.703% (-7.3%) from 66.016%
17158567492

Pull #119

github

tomkinsc 
prime matplotlib font cache during docker build
Pull Request #119: WIP swiftseq demux integration

431 of 1227 new or added lines in 8 files covered. (35.13%)

8 existing lines in 1 file now uncovered.

3241 of 5521 relevant lines covered (58.7%)

0.59 hits per line

Relevant lines Covered
5521 RELEVANT LINES 3241 COVERED LINES
0.59 HITS PER LINE
Source Files on ct-swiftseq-demux-integration

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
17158567492 ct-swiftseq-demux-integration prime matplotlib font cache during docker build Pull #119 tomkinsc github
58.7
17158568174 ct-swiftseq-demux-integration Merge ace241dd8 into 3d0418fae Pull #119 web-flow github
58.69
17158547963 ct-swiftseq-demux-integration Merge 2fdd5263b into 3d0418fae Pull #119 web-flow github
58.7
17000698803 ct-swiftseq-demux-integration refactor tabular reporting output of read counts following inner-barcode demux refactor tabular reporting output of read counts following inner-barcode demux, move csv creation logic from plot_sorted_curve() to a new function, write_barcode_metri... push tomkinsc github
58.7
16307915903 ct-swiftseq-demux-integration add illumina-interop to conda requirements push tomkinsc github
58.62
15840842085 ct-swiftseq-demux-integration ensure exceptions are propagated upon exit from custom sqlite3 connection context manager push tomkinsc github
59.04
15840819306 ct-swiftseq-demux-integration viral-baseimage to 0.3.0 push tomkinsc github
58.64
15840813054 ct-swiftseq-demux-integration change sqlite3 text_factory to str from sqlite3.OptimizedUnicode, which was removed in Python 3.12 (and was previously an alias to str) push tomkinsc github
58.64
15483328574 ct-swiftseq-demux-integration additional handling and logging related to async processes used for barcode counting push tomkinsc github
59.04
15482427238 ct-swiftseq-demux-integration log line re-phrasing push tomkinsc github
58.78
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