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broadinstitute / viral-core
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Repo Added 10 Sep 2019 08:19PM UTC
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17 Nov 2023 05:49PM UTC coverage: 0.0%. Remained the same
6907360734

Pull #90

github

tomkinsc
in illumina.py guess_barcodes, count NTCs by prefix if their count is not specified

in illumina.py guess_barcodes, count NTCs by prefix if their count is not specified, defaulting to count samples starting with "neg", "water", "NTC", or "H2O" as negative controls. The user can specify their own prefix for negative controls via the newly-added "--neg_control_prefixes" argument, which is mutually-exclusive with "--number_of_negative_controls". If neither is specified, NTCs are counted based on prefix.
Pull Request #90: in illumina.py guess_barcodes, count NTCs by prefix if their count is not specified

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6907360734 ct-barcode-helper-ntc-counting in illumina.py guess_barcodes, count NTCs by prefix if their count is not specified in illumina.py guess_barcodes, count NTCs by prefix if their count is not specified, defaulting to count samples starting with "neg", "water", "NTC", or "H2O" as ... Pull #90 17 Nov 2023 05:59PM UTC tomkinsc github
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