Clinical-Genomics / trailblazer

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• dependabot/npm_and_yarn/nuxt/elliptic-6.5.3
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• dependabot/npm_and_yarn/nuxt/jquery-3.4.0
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• dependabot/npm_and_yarn/nuxt/jquery-3.5.1
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• filter-rsync-analyses
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• fix-add-pendibg
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• fix-balsamic-filter
• fix-balsamic-filtering
• fix-broken-dependencies
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• fix-circular-import
• fix-cli-images
• fix-comment
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• fix-delivered
• fix-enum-spelling
• fix-image-vulnerabilities
• fix-install-workflow
• fix-job-id-parsing
• fix-job-serialization
• fix-jobs-missing-in-response
• fix-latest-analysis
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• fix-marshmallow-validation
• fix-microsalt
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• fix-missing-cancellable-field
• fix-missing-ticket
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• fix-naming
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• fix-ruff
• fix-scaling
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• fix-slurm-client
• fix-slurm-job-info
• fix-slurm-model
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• fix-tower-bug
• fix-tower-status-bug
• fix-types
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• fix/cg-clean-mipauto-mip-backwards-compat
• fix/decouple-trailblazer-google
• fix/force-delete
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• fix/remove-em-as-codeowner
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• fix/set-analysis-completed-comment
• fix_analysis_failed_jobs
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• fix_delete_analysis
• fix_long_timestamps
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• fix_time_elapsed
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• fix_yaml
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• include-order-id-in-analysis-response
• include-upload-jobs-in-analysis-response
• make-abbreviation-non-nullable
• make-delivered-fields-nullable
• make_config_path_optional
• master
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• mip-dna-v8.0
• mip-dna-v8.2
• mip-pedigree
• mip-rd-rna
• mip6
• mip7-command
• mip_family_id_compatibility
• mip_files
• mip_parse_sampleinfo
• missing-qccollect
• modify_travis
• move-rsync-filtering
• move_start_of_mip_to_cg
• mvp-balsamic
• parse_qcmetrics
• patch-analysis-endpoint
• patch-pending-tower-analyses
• patch-scan
• patch-search
• patch-status-calc
• patch-status-update
• patch-update
• patch-update-visibility
• patch-upload-jobs
• pin-docker-base-image-version
• progress_as_fraction
• quick_fix_tw_status
• rank_model_version_from_get_trending
• reduce-action-duplication
• refaactor-get-analyses-in-ls-cmd
• refactor-analyses
• refactor-analyses-filtering
• refactor-api-layer
• refactor-data_analysis-and-pipeline-to-workflow
• refactor-endpoints
• refactor-fastq-workflow
• refactor-linters
• refactor-sql-filter-function-names
• refactor-to-PEP-0663
• refactor-to-PEP-604
• refactor-to-pep-0585
• refactor-tower-client
• refactor_add_comment
• refactor_add_pending_analysis
• refactor_add_user
• refactor_basehandler
• refactor_cancel_analysis
• refactor_cancel_slurm_job
• refactor_constants
• refactor_date_module
• refactor_delete_analysis
• refactor_get_analysis
• refactor_get_latest_analysis
• refactor_job
• refactor_job_in_update_slurm_jobs
• refactor_mark_analyses_deleted
• refactor_query_slurm
• refactor_query_tower
• refactor_query_tower_2
• refactor_reading_squeue_output
• refactor_set_analysis_status
• refactor_set_analysis_uploaded
• refactor_sql_aggregate_failed
• refactor_sql_analysis
• refactor_sql_archive_user
• refactor_sql_info
• refactor_sql_user
• refactor_sql_users
• refactor_update_analysis_from_slurm_output
• refactor_update_jobs
• refactor_update_ongoing_analyses
• refactor_update_run_status
• refactor_update_tower_run_status
• refresh-token
• remove-action
• remove-alchy
• remove-avatar
• remove-balsamic-qc
• remove-is_deleted
• remove-pylint-config
• remove-unused-code
• remove-unused-endpoints
• remove-unused-job-param
• remove-unused-query-analyses
• remove-unused-reformat-logic
• remove-user-from-response
• remove_empty_fixture_call
• remove_get_latest_analysis_status
• remove_is_latest_analysis_completed
• remove_is_latest_analysis_failed
• remove_is_latest_analysis_ongoing
• remove_python-dateutil
• remove_test_fixture_prefix
• removes-mip
• rename-family-to-case
• rename-sars-cov-2-to-mutant
• report-delivered-correctly
• return-delivery-data
• return-most-recent-failed-job
• reverse-8-1-1
• revert
• revert-132-reverse-8-1-1
• revert-507-add-token-verification
• revert-510-add-token-verification
• revert-68-mip-rd-rna
• revert-latest-failed
• revert-old
• revert-refactoring
• rework-delivered-counting
• rewriting_trending_from_mip6_into_mip5
• rm-conda-env-and-use-container
• rm_docutils
• rm_get_elapsed_time
• rm_mip_start
• rm_models_import
• rm_pytest_yield
• rm_sql_jobs_function
• rm_trailblazer_check
• rm_travis
• rm_universal_config_option
• rna-analysis-in-hk
• rnafusion_support
• scan-containers
• set-analysis-to-fail
• set-upload-date-fastq
• set_status_cli
• show-failed-last-month
• speed-up-analyses-endpoint
• speedup-retrieval-of-analyses
• speedup-retrieving-latest-failed-job
• store-multiqc
• str-vcf
• support-slurm-cli-or-api
• tag-image-with-version
• test-fix
• test-rest-api
• test_scope
• test_server
• test_server_2
• test_server_3
• test_server_4
• testing-tb-on-k
• travis-3.7
• tw_commplete_as_qc
• udate-werkzug
• unfreeze_pytest
• uodate-python
• update-PR-template
• update-black
• update-black-and-ruff
• update-bootstrap
• update-certs
• update-cli-image
• update-code-owners
• update-dependencies
• update-deploy-instructions
• update-jinja-2
• update-jinja2
• update-jquery
• update-linters
• update-order-status
• update-readme
• update-slurm-upload-jobs
• update-upload-jobs
• update-vue-app-packages
• update_actions
• update_black
• update_code_owners
• update_codeowners
• update_deps
• update_docker_actions
• update_name_for_mip6flag
• update_name_for_mip6flag_again
• update_pydantic
• update_python
• update_pythonn
• update_readme
• update_ruff
• updates-bootstrap
• upgrade-deploy-instructions
• upgrade-python
• upgrade-sqlalchemy
• upgrades-bootstrap-to-4.3.x
• uploaded-at-column
• usalt
• use-abbrev
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• use-latest-analysis
• use-poetry
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• user-endpoints

Merge a481e3a94 into bd7ea7163