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broadinstitute / hellbender / 2667

Builds Branch Commit Type Ran Committer Via Coverage
2667 dr_lb_spark_bqsr BQSR on spark -Ported BQSR and ApplyBQSR to spark. -Refactored the BQSR engine so that all versions of BQSR (walker, dataflow, and spark) call into a common engine, and removed duplicated versions of the engine from the codebase. push 25 Sep 2015 07:26AM UTC droazen travis-ci pending completion   set done
2666 master BQSR on spark -Ported BQSR and ApplyBQSR to spark. -Refactored the BQSR engine so that all versions of BQSR (walker, dataflow, and spark) call into a common engine, and removed duplicated versions of the engine from the codebase. Pull #911 25 Sep 2015 02:33AM UTC droazen travis-ci pending completion   set done
2665 dr_lb_spark_bqsr BQSR on spark -Ported BQSR and ApplyBQSR to spark. -Refactored the BQSR engine so that all versions of BQSR (walker, dataflow, and spark) call into a common engine, and removed duplicated versions of the engine from the codebase. push 25 Sep 2015 02:14AM UTC laserson travis-ci pending completion   set done
2664 dr_lb_spark_bqsr_bak BQSR on spark -Ported BQSR and ApplyBQSR to spark. -Refactored the BQSR engine so that all versions of BQSR (walker, dataflow, and spark) call into a common engine, and removed duplicated versions of the engine from the codebase. push 25 Sep 2015 02:04AM UTC droazen travis-ci pending completion   set done
2663 master Merge pull request #922 from broadinstitute/lb_java_logger_levels reducing log spam push 25 Sep 2015 01:45AM UTC laserson travis-ci pending completion   set done
2662 master use BucketUtils to be able to save to hdfs and gcs Pull #920 25 Sep 2015 01:28AM UTC akiezun travis-ci pending completion   set done
2661 ak_countReads_spark use BucketUtils to be able to save to hdfs and gcs push 25 Sep 2015 01:16AM UTC akiezun travis-ci pending completion   set done
2660 jp_perf_apply2 added knobs for tweaking push 25 Sep 2015 12:07AM UTC jean-philippe-martin travis-ci pending completion   set done
2659 master BQSR on spark -Ported BQSR and ApplyBQSR to spark. -Refactored the BQSR engine so that all versions of BQSR (walker, dataflow, and spark) call into a common engine, and removed duplicated versions of the engine from the codebase. Pull #911 24 Sep 2015 11:31PM UTC droazen travis-ci pending completion   set done
2656 master BQSR on spark -Ported BQSR and ApplyBQSR to spark. -Refactored the BQSR engine so that all versions of BQSR (walker, dataflow, and spark) call into a common engine, and removed duplicated versions of the engine from the codebase. Pull #911 24 Sep 2015 11:03PM UTC droazen travis-ci pending completion   set done
2655 master Making java.util.logging obey our verbosity setting setting our logging level to WARN in tests Pull #922 24 Sep 2015 10:43PM UTC lbergelson travis-ci pending completion   set done
2654 lb_java_logger_levels Making java.util.logging obey our verbosity setting setting our logging level to WARN in tests push 24 Sep 2015 10:29PM UTC lbergelson travis-ci pending completion   set done
2653 master Making java.util.logging obey our verbosity setting setting our logging level to WARN in tests Pull #922 24 Sep 2015 10:13PM UTC lbergelson travis-ci pending completion   set done
2651 tw_test (Spark) Use sequence dictionary if available. push 24 Sep 2015 09:55PM UTC tomwhite travis-ci pending completion   set done
2650 master BQSR on spark -Ported BQSR and ApplyBQSR to spark. -Refactored the BQSR engine so that all versions of BQSR (walker, dataflow, and spark) call into a common engine, and removed duplicated versions of the engine from the codebase. Pull #911 24 Sep 2015 09:45PM UTC droazen travis-ci pending completion   set done
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