broadinstitute / hellbender / 2649

Builds Branch Commit Type Ran Committer Via Coverage
2649 dr_lb_spark_bqsr BQSR on spark -Ported BQSR and ApplyBQSR to spark. -Refactored the BQSR engine so that all versions of BQSR (walker, dataflow, and spark) call into a common engine, and removed duplicated versions of the engine from the codebase. push droazen travis-ci pending completion   set done
2648 master count reads in spark + integration test Pull #920 akiezun travis-ci pending completion   set done
2647 ak_countReads_spark count reads in spark + integration test push akiezun travis-ci pending completion   set done
2646 master BQSR on spark -Ported BQSR and ApplyBQSR to spark. -Refactored the BQSR engine so that all versions of BQSR (walker, dataflow, and spark) call into a common engine, and removed duplicated versions of the engine from the codebase. Pull #911 droazen travis-ci pending completion   set done
2645 dr_lb_spark_bqsr BQSR on spark -Ported BQSR and ApplyBQSR to spark. -Refactored the BQSR engine so that all versions of BQSR (walker, dataflow, and spark) call into a common engine, and removed duplicated versions of the engine from the codebase. push droazen travis-ci pending completion   set done
2643 dr_lb_spark_bqsr BQSR on spark -Ported BQSR and ApplyBQSR to spark. -Refactored the BQSR engine so that all versions of BQSR (walker, dataflow, and spark) call into a common engine, and removed duplicated versions of the engine from the codebase. push droazen travis-ci pending completion   set done
2642 master BQSR on spark -Ported BQSR and ApplyBQSR to spark. -Refactored the BQSR engine so that all versions of BQSR (walker, dataflow, and spark) call into a common engine, and removed duplicated versions of the engine from the codebase. Pull #911 droazen travis-ci pending completion   set done
2640 ak_countReads_spark count reads push akiezun travis-ci pending completion   set done
2637 master Merge pull request #884 from broadinstitute/dek_CollectJumpingLibraryMetrics_IT CollectJumpingMetricsIntegrationTest push akiezun travis-ci pending completion   set done
2636 master Merge pull request #857 from broadinstitute/dek_normalizeFasta_IT Test for NormalizeFasta push akiezun travis-ci pending completion   set done
2635 master Completed Integration Test for NormalizeFasta Pull #857 dekling travis-ci pending completion   set done
2634 dek_normalizeFasta_IT Completed Integration Test for NormalizeFasta push akiezun travis-ci pending completion   set done
2612 ak_genotyper more tests push akiezun travis-ci pending completion   set done
2633 master remove programmer name Pull #913 jean-philippe-martin travis-ci pending completion   set done
2632 jp_binarysearch remove programmer name push jean-philippe-martin travis-ci pending completion   set done