broadinstitute / hellbender / 2859

Builds Branch Commit Type Ran Committer Via Coverage
2859 master Merge pull request #928 from broadinstitute/tw_ul_spark_bqsr Add reference broadcasting to BQSR push droazen travis-ci pending completion   set done
2858 master Add reference broadcasting to BQSR Adds a new file to LFS: human_g1k_v37.20.21.2bit. It was by applying the faToTwoBit binary from the "kent" UCSC utilities package on the similarly named fasta reference already in the repo. Pull #928 laserson travis-ci pending completion   set done
2857 tw_ul_spark_bqsr Add reference broadcasting to BQSR Adds a new file to LFS: human_g1k_v37.20.21.2bit. It was by applying the faToTwoBit binary from the "kent" UCSC utilities package on the similarly named fasta reference already in the repo. push laserson travis-ci pending completion   set done
2856 master Add reference broadcasting to BQSR Adds a new file to LFS: human_g1k_v37.20.21.2bit. It was by applying the faToTwoBit binary from the "kent" UCSC utilities package on the similarly named fasta reference already in the repo. Pull #928 laserson travis-ci pending completion   set done
2855 tw_ul_spark_bqsr Add reference broadcasting to BQSR Adds a new file to LFS: human_g1k_v37.20.21.2bit. It was by applying the faToTwoBit binary from the "kent" UCSC utilities package on the similarly named fasta reference already in the repo. push laserson travis-ci pending completion   set done
2854 master address comments Pull #953 akiezun travis-ci pending completion   set done
2853 ak_MeanQualityByCycle_spark2 address comments push akiezun travis-ci pending completion   set done
2852 master GATKSparkTool: first step towards unifying handling of standard tool inputs in Spark -Created a new base class for Spark tools, GATKSparkTool, that centrally manages and validates standard tool inputs (reads, reference, and intervals). This allo... Pull #955 droazen travis-ci pending completion   set done
2851 dr_gatksparktool GATKSparkTool: first step towards unifying handling of standard tool inputs in Spark -Created a new base class for Spark tools, GATKSparkTool, that centrally manages and validates standard tool inputs (reads, reference, and intervals). This allo... push droazen travis-ci pending completion   set done
2850 master GATKSparkTool: first step towards unifying handling of standard tool inputs in Spark -Created a new base class for Spark tools, GATKSparkTool, that centrally manages and validates standard tool inputs (reads, reference, and intervals). This allo... Pull #955 droazen travis-ci pending completion   set done
2849 dr_gatksparktool GATKSparkTool: first step towards unifying handling of standard tool inputs in Spark -Created a new base class for Spark tools, GATKSparkTool, that centrally manages and validates standard tool inputs (reads, reference, and intervals). This allo... push droazen travis-ci pending completion   set done
2848 dr_gatksparktool GATKSparkTool push droazen travis-ci pending completion   set done
2847 master MeanQualityByCycle in Spark Pull #953 akiezun travis-ci pending completion   set done
2846 ak_MeanQualityByCycle_spark2 MeanQualityByCycle in Spark push akiezun travis-ci pending completion   set done
2845 master Support reading VCF files from Hadoop. Pull #851 tomwhite travis-ci pending completion   set done