broadinstitute / hellbender / 2621

Builds Branch Commit Type Ran Committer Via Coverage
2621 lb_scaling some naming push lbergelson travis-ci pending completion   set done
2618 master Integration test for CollectJumpingLibraryMetrics Pull #884 dekling travis-ci pending completion   set done
2617 dek_CollectJumpingLibraryMetrics_IT Integration test for CollectJumpingLibraryMetrics push akiezun travis-ci pending completion   set done
2614 master test for CollectWgsMetrics Pull #844 akiezun travis-ci pending completion   set done
2613 ak_CollectWgsMetrics_test test for CollectWgsMetrics push akiezun travis-ci pending completion   set done
2603 ak_genotyper move some code to GeneralPloidyExactAFCalculator. Delete useless class IndelGenotypeLikelihoodsCalculationModel and GeneralPloidyGenotypeLikelihoods push akiezun travis-ci pending completion   set done
2601 dr_lb_spark_bqsr BQSR on spark -Ported BQSR and ApplyBQSR to spark. -Refactored the BQSR engine so that all versions of BQSR (walker, dataflow, and spark) call into a common engine, and removed duplicated versions of the engine from the codebase. push droazen travis-ci pending completion   set done
2600 master BQSR on spark -Ported BQSR and ApplyBQSR to spark. -Refactored the BQSR engine so that all versions of BQSR (walker, dataflow, and spark) call into a common engine, and removed duplicated versions of the engine from the codebase. Pull #911 droazen travis-ci pending completion   set done
2599 dr_lb_spark_bqsr BQSR on spark -Ported BQSR and ApplyBQSR to spark. -Refactored the BQSR engine so that all versions of BQSR (walker, dataflow, and spark) call into a common engine, and removed duplicated versions of the engine from the codebase. push droazen travis-ci pending completion   set done
2598 master Add a comment explaining parallelism of 0. Pull #916 tomwhite travis-ci pending completion   set done
2597 tw_parallelism_comment Add a comment explaining parallelism of 0. push tomwhite travis-ci pending completion   set done
2596 ak_genotyper delete unused DiploidSNPGenotypeLikelihoods push akiezun travis-ci pending completion   set done
2595 ak_genotyper tests for GenotypeLikelihoodCalculators. Removal of mutable static state push akiezun travis-ci pending completion   set done
2594 dr_lb_spark_bqsr nulling sam headers for spark push lbergelson travis-ci pending completion   set done
2593 master Merge pull request #915 from broadinstitute/lb_fix_bqsr_concurrency_issue fixing dataflow/spark bqsr concurrency issues push lbergelson travis-ci pending completion   set done