pirl-unc / tsarina
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LAST BUILD ON BRANCH main
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coverage: 60.317% (+1.6%) from 58.738%
25166092230

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github

web-flow 
v1.2.4: add MS-tiered panel command (#38)

1295 of 2147 relevant lines covered (60.32%)

0.6 hits per line

Relevant lines Covered
2147 RELEVANT LINES 1295 COVERED LINES
0.6 HITS PER LINE
Source Files on main

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
25166092230 main v1.2.4: add MS-tiered panel command (#38) push web-flow github
60.32
25162891577 main v1.2.3: refresh hitlist data docs (#37) push web-flow github
58.74
25162745019 main v1.2.2: fix panel MS metrics (#36) push web-flow github
58.74
25143441762 main v1.2.1: centralize MS evidence and HLA normalization (#35) * v1.2.1: centralize MS evidence and HLA normalization * Centralize remaining MS evidence call paths push web-flow github
56.41
24857641153 main v1.2.0: bump hitlist pin to >=1.15.1 + --lengths pushdown with class-derived defaults (#30) - Bumps hitlist pin from >=1.14.2 to >=1.15.1, unlocking length_min/length_max on load_observations / load_binding / load_all_evidence (hitlist#118) plus ... push web-flow github
49.38
24797001780 main v1.1.0: delegate proteome k-mer walk to hitlist.proteome.proteome_kmer_set (closes #99) (#29) The proteome-walk primitive tsarina has been caching locally since v0.10.1 (then unified under _proteome_kmers in v1.0.1) is now available upstream as h... push web-flow github
48.8
24737563735 main v1.0.4: refs CLI smoke + merge-path coverage (#28) Tightens tsarina hits --format refs test coverage without touching production code. - test_cli_hits.py: +2 smoke tests for refs as an argparse choice (listed in --help; unknown values rejected... push web-flow github
49.23
24737461957 main v1.0.3: spanning progress indication (#27) Multi-minute tsarina spanning runs now emit progress messages on stderr instead of going silent during the scoring phase. Library stays quiet by default (opt-in via on_progress callback); CLI wires the s... push web-flow github
48.66
24737341473 main v1.0.2: spanning test polish — require_cta_exclusive routing, multi-length, CLI smoke (#26) Tightens test coverage on tsarina.spanning and tsarina.cli_spanning. No behavior change. - require_cta_exclusive=True/False routing tests track which of ... push web-flow github
47.52
24735655636 main v1.0.1: unify k-mer enumeration behind _proteome_kmers (#25) Collapses the three ad-hoc proteome-walk loops (peptides._non_cta_proteome_kmers, viral._human_proteome_kmers, and the two inline walks in viral.cancer_specific_viral_peptides) into a s... push web-flow github
47.41
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