• Home
  • Features
  • Pricing
  • Docs
  • Announcements
  • Sign In

openvax / pyensembl
96%
master: 83%

Build:
Build:
LAST BUILD BRANCH: patch-2
DEFAULT BRANCH: master
Repo Added 05 Jan 2018 08:34PM UTC
Files 21
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst

LAST BUILD ON BRANCH v2.3.12
branch: v2.3.12
CHANGE BRANCH
x
Reset
  • v2.3.12
  • add-GRCm39
  • add-fly
  • comparison-on-Locus
  • fix-MT-normalization
  • fix-pypi-autodeploy
  • fixing-travis
  • get-rid-of-ensembl-id-checking-too-many-exceptions
  • issue-287-ensembl-110
  • main
  • master
  • max-release-100
  • max-release-99
  • new-ensembl-versions-96-97
  • only-create-dir-if-necessary
  • remove-assert-statements
  • remove-encrypted-values-for-external-contrib
  • remove-pandas-dependency
  • up-max-release
  • v2.3.11
  • v2.3.13
  • v2.3.9

28 Mar 2024 05:17PM UTC coverage: 96.024% (-0.1%) from 96.172%
8471144846

push

github

web-flow
Add support for downloading plant species with pyEnsembl (#305)

This commit introduces the ability to download plant species data using pyEnsembl. We've added the 'is_plant' parameter to the Species class, and registered two new species: Arabidopsis Thaliana and Oryza Sativa (Rice).

We've also added the ENSEMBL_PLANTS_FTP_SERVER URL, and the PLANTS_GTF_SUBDIR_TEMPLATE and PLANTS_FASTA_SUBDIR_TEMPLATE for creating the download links. The code checks if the species is a plant to determine which templates to use.

35 of 39 new or added lines in 5 files covered. (89.74%)

1908 of 1987 relevant lines covered (96.02%)

2.82 hits per line

Relevant lines Covered
Build:
Build:
1987 RELEVANT LINES 1908 COVERED LINES
2.82 HITS PER LINE
Source Files on v2.3.12
Detailed source file information is not available for this build.

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
8471144846 v2.3.12 Add support for downloading plant species with pyEnsembl (#305) This commit introduces the ability to download plant species data using pyEnsembl. We've added the 'is_plant' parameter to the Species class, and registered two new species: Arabidop... push 28 Mar 2024 05:23PM UTC web-flow github
96.02
See All Builds (174)
  • Repo on GitHub
STATUS · Troubleshooting · Open an Issue · Sales · Support · CAREERS · ENTERPRISE · START FREE · SCHEDULE DEMO
ANNOUNCEMENTS · TWITTER · TOS & SLA · Supported CI Services · What's a CI service? · Automated Testing

© 2026 Coveralls, Inc