openvax / pyensembl / 28965653201

Builds Branch Commit Type Ran Committer Via Coverage
28965653201 v2.10.4 Bump version to 2.10.4 Claude-Session: https://claude.ai/code/session_016pKPSmCAts4cacC3CQ9qsL push iskandr github
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28965618070 main Bump version to 2.10.4 Claude-Session: https://claude.ai/code/session_016pKPSmCAts4cacC3CQ9qsL push iskandr github
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28965583749 main Fix #362: don't reconfigure root logger when importing pyensembl.shell (#363) * Fix #362: don't reconfigure root logger when importing pyensembl.shell pyensembl/shell.py called logging.config.fileConfig() at module top-level. fileConfig defaults... push web-flow github
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28965201756 fix-362-shell-root-logger test: restore global logging state in configure_logging test configure_logging() applies logging.conf, which mutates process-global logging state (replaces the pyensembl logger's NullHandler with a live console handler and reconfigures root). Sna... Pull #363 iskandr github
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28954107378 fix-362-shell-root-logger Fix #362: don't reconfigure root logger when importing pyensembl.shell pyensembl/shell.py called logging.config.fileConfig() at module top-level. fileConfig defaults to disable_existing_loggers=True, so importing the module (a) attached pyensembl... Pull #363 iskandr github
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28666897435 v2.10.3 Bump version to 2.10.3 Patch release: declare supported Python versions (3.9–3.14) in package classifiers (#361) so PyPI metadata matches the tested matrix. Claude-Session: https://claude.ai/code/session_018iM7tTGPFS6ija49yAQpSM push iskandr github
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28666857422 main Declare supported Python versions in package classifiers (#361) The classifiers list only had a bare "Programming Language :: Python", so PyPI showed no per-version support even though requires-python is ">=3.9" and CI tests 3.9 through 3.14 (#36... push web-flow github
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28666872617 main Bump version to 2.10.3 Patch release: declare supported Python versions (3.9–3.14) in package classifiers (#361) so PyPI metadata matches the tested matrix. Claude-Session: https://claude.ai/code/session_018iM7tTGPFS6ija49yAQpSM push iskandr github
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28665981384 declare-python-classifiers Declare supported Python versions in package classifiers The classifiers list only had a bare "Programming Language :: Python", so PyPI showed no per-version support even though requires-python is ">=3.9" and CI tests 3.9 through 3.14 (#360). Add... Pull #361 iskandr github
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28665636971 v2.10.2 Bump version to 2.10.2 Patch release: CI now tests Python 3.13 and 3.14 (#360), validating the 3.14 argparse fix (#318/#359) end-to-end on real interpreters. Claude-Session: https://claude.ai/code/session_018iM7tTGPFS6ija49yAQpSM push iskandr github
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28665599453 main Bump version to 2.10.2 Patch release: CI now tests Python 3.13 and 3.14 (#360), validating the 3.14 argparse fix (#318/#359) end-to-end on real interpreters. Claude-Session: https://claude.ai/code/session_018iM7tTGPFS6ija49yAQpSM push iskandr github
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28665532286 main CI: add Python 3.13 and 3.14 to test matrix (#360) The matrix previously topped out at 3.12, leaving no coverage for 3.13 or 3.14. Add both so the suite validates newer interpreters — in particular the Python 3.14 argparse change (nested argument... push web-flow github
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28665034914 add-python-314-ci CI: add Python 3.13 and 3.14 to test matrix The matrix previously topped out at 3.12, leaving no coverage for 3.13 or 3.14. Add both so the suite validates newer interpreters — in particular the Python 3.14 argparse change (nested argument groups... Pull #360 iskandr github
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25821529179 main test.sh: memory-aware pytest-xdist worker count Mirror the worker-cap logic from trufflepig/hitlist/tsarina/vaxrank so concurrent test runs across sibling repos can't fork-bomb the laptop. Picks min(cpu_reserve, available_RAM / PER_WORKER_GB), re... push iskandr github
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25818977747 v2.10.1 Fix #169: add three-tier protein-coding biotype ontology (#357) Introduces a layered set of flags for "does this transcript make a polypeptide?": * `is_protein_coding` - unchanged, strict canonical `protein_coding` only. Preserves the contract... push web-flow github
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