dnanexus-rnd / GLnexus

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LAST BUILD ON BRANCH mlin-deepvariant-20181109

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• mlin-deepvariant-20181109
• mlin-wip
• master
• delineation-unification-placeholders-v2
• ubcf
• split_gvcf_into_chromosomes
• ubcf_cleanup
• mlin-bcfreader-refactor
• mlin-range-bcf-end
• mlin-placeholder-gvcf-genotyper
• genomic_range_buckets
• split_chrom
• split_ch2
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• import_gvcf_thread_safety
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• orodeh_unify_sites_as_stage
• orodeh_report_bad_yaml_file
• mlin-discovery-unification-quality
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• orodeh_config_param_for_new_subcommands
• unify_alleles_on_vector_inputs
• mlin-minAQ2
• orodeh_cleanup_unify_and_discover
• orodeh_stream_yaml
• orodeh_yaml_stream_unify_sites
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• mlin-unification-alt-dna
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• ymen-format-field-defaults
• ymen-format-field-ignore-ref
• orodeh_discovered_alleles_parallel_load
• mlin-genotype-revision
• mlin-unifier-allele-frequencies
• orodeh-vcf-shard-merge
• orodeh-vcf-shard-merge-bgzip
• ymen-format-fields-clear-on-rnc
• orodeh-vcf-shard-merge-mt-bgzip
• orodeh_mt_bgzip
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• orodeh_simple_public_cli
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• mlin-genotype-revision-simplified
• mlin-genotype-revision-ARCHIVED
• mlin-censor-nocall-format-fields
• v0.1.0
• mlin-variant-qual
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• orodeh_experiments
• orodeh-long-confidence-intervals
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• orodeh_expose_bucket_size_arg
• orodeh_capnp_debug
• orodeh_capnp_debug_II
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• v0.2.0
• revert-111-orodeh_capnp_debug_III
• mlin-upgrade-capnp
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• mlin-shorten-keys
• mlin-wecall
• v0.3.0
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• v0.3.2
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• mlin-etl-folders
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• revert-122-mlin-skip-index
• mlin-revise-homalt
• mlin-deepvariant
• mlin-readme
• mlin-dv-pl
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• mlin-detect-misaligned-indels
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• mlin-call-two-overlapping-variants
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• mlin-travis-valgrind
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• v0.5.0
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• v0.6.1
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• mlin-issue168
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• mlin-refactor-ingestion-exceptions
• v1.1.10
• v1.1.11
• mlin-ref-PL
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• v1.2.0-pre.0
• mlin-travis-modernization
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• v1.1.12
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• v1.2.0
• v1.2.1
• v1.2.2
• mlin-multistage-dockerfile
• mlin-dv-partial-data
• v1.2.3
• mlin-overlap-compactions-discovery
• mlin-revise11
• v1.2.4
• v1.2.5
• v1.2.6
• main
• v1.2.7
• v1.1.12-1
• 1.1.12-1_add_max_allele_dv
• mlin/top2-half-calls
• mlin/ghci
• HEAD
• mlin/dv-prior-calibration
• mlin/test-gvcf-norm
• mlin/GxS

Build # 1906

Build Type

push

travis-ci

Committed by mlin

Commit Message

cli: fill out config descriptions

Run Details

4155 of 4448 relevant lines covered (93.41%)

949003.32 hits per line