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dnanexus-rnd / GLnexus
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master: 93%

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LAST BUILD BRANCH: mlin/GxS
DEFAULT BRANCH: master
Repo Added 27 Jul 2015 05:17AM UTC
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LAST BUILD ON BRANCH mlin-bulk-insert-buffer
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pending completion
1619

push

travis-ci

mlin
Handle unexpected corner case of including alleles dangling over edges of target regions (25ddb7a)

An apparently dangling allele (as written in the GVCF) might fall outside the target region after any reference padding is trimmed. We push the target range information into the unifier to detect this.

3943 of 4288 relevant lines covered (91.95%)

236783.83 hits per line

Relevant lines Covered
Build:
Build:
4288 RELEVANT LINES 3943 COVERED LINES
236783.83 HITS PER LINE
Source Files on mlin-bulk-insert-buffer
  • List 0
  • Changed 22
  • Source Changed 4
  • Coverage Changed 22
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
1619 mlin-bulk-insert-buffer Handle unexpected corner case of including alleles dangling over edges of target regions (25ddb7a) An apparently dangling allele (as written in the GVCF) might fall outside the target region after any reference padding is trimmed. We push the tar... push 20 Dec 2017 10:51AM UTC mlin travis-ci pending completion  
1617 mlin-bulk-insert-buffer BCFKeyValueData: buffer DB inserts to reduce write lock contention during bulk loads push 20 Dec 2017 05:53AM UTC mlin travis-ci pending completion  
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