cokelaer / sequana
74%
master: 67%

LAST BUILD BRANCH: dev
DEFAULT BRANCH: master
Repo Added
Files 166
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst

LAST BUILD ON BRANCH dev
branch: SELECT
CHANGE BRANCH
x

coverage: 74.19% (+0.01%) from 74.178%
8325299538

push

github

cokelaer 
Update taxonomy so as to retrieve DBs from zenodo (toydb and viruses_masking)

30 of 30 new or added lines in 3 files covered. (100.0%)

8 existing lines in 6 files now uncovered.

13536 of 18245 relevant lines covered (74.19%)

2.96 hits per line

Relevant lines Covered
18245 RELEVANT LINES 13536 COVERED LINES
2.96 HITS PER LINE
Source Files on master

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
8325299538 dev Update taxonomy so as to retrieve DBs from zenodo (toydb and viruses_masking) push cokelaer github
74.19
8272025592 dev update metadata push cokelaer github
74.18
8108841843 dev Some fixes on rnadiff when no GFF is provided push cokelaer github
74.1
8101834251 dev New variants module to replace freebayes_vcf_filter freebayes_vcf_filter is kept for back compatiblity push cokelaer github
74.11
8101665351 dev New variants module to replace freebayes_vcf_filter freebayes_vcf_filter is kept for back compatiblity push cokelaer github
74.11
8047749906 dev Revisit taxonomy module to save data in csv.gz push cokelaer github
74.46
8018111802 dev Major fix on PCA and add batch effect plots push cokelaer github
74.98
8018108837 dev Major fix on PCA and add batch effect plots push cokelaer github
74.98
8018114112 dev Major fix on PCA and add batch effect plots push cokelaer github
74.98
7964491480 dev add --model in rnadiff we also remove the version of the rnaseq pipeline (requires the rnaseq pipleine to be imported, besides, the local version may not be the one used by the original analysis push cokelaer github pending completion  
See All Builds (147)