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cokelaer / sequana / 37278772873
78%
master: 67%

Build:
Build:
LAST BUILD BRANCH: main
DEFAULT BRANCH: master
Ran 05 Oct 2026 07:47AM UTC
Jobs 3
Files 223
Run time 1min
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05 Oct 2026 07:37AM UTC coverage: 77.768% (+0.2%) from 77.575%
37278772873

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cokelaer
fix: Remove incompatible include_groups parameter from groupby calls

include_groups parameter doesn't exist in pandas 3.0.6. Removing it allows
salmon.py to work with current pandas versions while maintaining compatibility.

2 of 2 new or added lines in 1 file covered. (100.0%)

49 existing lines in 3 files now uncovered.

20883 of 26853 relevant lines covered (77.77%)

2.33 hits per line

Coverage Regressions

Lines Coverage ∆ File
43
92.4
2.22% sequana/ribodesigner.py
4
73.33
-13.33% sequana/scripts/main/ribodesigner.py
2
90.85
-0.63% sequana/modules_report/rnadiff.py
Jobs
ID Job ID Ran Files Coverage
1 37278772873.1 05 Oct 2026 07:47AM UTC 223
77.76
2 37278772873.2 05 Oct 2026 07:52AM UTC 223
77.75
3 37278772873.3 05 Oct 2026 07:54AM UTC 223
77.76
Source Files on build 37278772873
  • Tree
  • List 223
  • Changed 6
  • Source Changed 0
  • Coverage Changed 6
Coverage ∆ File Lines Relevant Covered Missed Hits/Line
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