broadinstitute / viral-ngs
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LAST BUILD BRANCH: ct-krakenuniq-summary-kmer-filter
DEFAULT BRANCH: master
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Files 43
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LAST BUILD ON BRANCH sy-kraken2-deplete
branch: sy-kraken2-deplete
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Relevant lines Covered
10101 RELEVANT LINES 7313 COVERED LINES
0.72 HITS PER LINE
Source Files on sy-kraken2-deplete
Coverage ∆ File Lines Relevant Covered Missed Hits/Line Branch Hits Branch Misses

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
508 sy-kraken2-deplete Kraken2 depletion for human reads as alternative to bmtagger * Add kraken_unclassified command that combines p filtering with depletion * Less sensitive than bmtagger (tradeoffs) but much faster. Can be controlled with p. p=0.01-0.05 a close to... Pull #938 web-flow travis-ci-com pending completion  
507 sy-kraken2-deplete Kraken2 depletion for human reads as alternative to bmtagger * Add kraken_unclassified command that combines p filtering with depletion * Less sensitive than bmtagger (tradeoffs) but much faster. Can be controlled with p. p=0.01-0.05 a close to... push yesimon travis-ci-com pending completion  
506 sy-kraken2-deplete Kraken2 depletion for human reads as alternative to bmtagger * Add kraken_unclassified command that combines p filtering with depletion * Less sensitive than bmtagger (tradeoffs) but much faster. Can be controlled with p. p=0.01-0.05 a close to... Pull #938 web-flow travis-ci-com pending completion  
505 sy-kraken2-deplete Kraken2 depletion for human reads as alternative to bmtagger * Add kraken_unclassified command that combines p filtering with depletion * Less sensitive than bmtagger (tradeoffs) but much faster. Can be controlled with p. p=0.01-0.05 a close to... push yesimon travis-ci-com pending completion  
502 sy-kraken2-deplete Kraken2 depletion for human reads as alternative to bmtagger * Add kraken_unclassified command that combines p filtering with depletion * Less sensitive than bmtagger (tradeoffs) but much faster. Can be controlled with p. p=0.01-0.05 a close to... Pull #938 web-flow travis-ci-com pending completion  
501 sy-kraken2-deplete Kraken2 depletion for human reads as alternative to bmtagger * Add kraken_unclassified command that combines p filtering with depletion * Less sensitive than bmtagger (tradeoffs) but much faster. Can be controlled with p. p=0.01-0.05 a close to... push yesimon travis-ci-com pending completion  
360 sy-kraken2-deplete Kraken2 depletion for human reads as alternative to bmtagger * Add kraken_unclassified command that combines p filtering with depletion * Less sensitive than bmtagger (tradeoffs) but much faster. Can be controlled with p. p=0.01-0.05 a close to... Pull #938 web-flow travis-ci-com pending completion  
359 sy-kraken2-deplete Kraken2 depletion for human reads as alternative to bmtagger * Add kraken_unclassified command that combines p filtering with depletion * Less sensitive than bmtagger (tradeoffs) but much faster. Can be controlled with p. p=0.01-0.05 a close to... push yesimon travis-ci-com pending completion  
358 sy-kraken2-deplete Kraken2 deplete push yesimon travis-ci-com pending completion  
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