broadinstitute / catch
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LAST BUILD ON BRANCH download-seqs
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305

Pull #27

travis-ci-com

web-flow 
Describe 'download:TAXID' input format in README
Pull Request #27: Add ability to automatically download sequences for a taxonomy

1560 of 1777 branches covered (87.79%)

249 of 249 new or added lines in 2 files covered. (100.0%)

5400 of 5708 relevant lines covered (94.6%)

2.84 hits per line

Relevant lines Covered
5708 RELEVANT LINES 5400 COVERED LINES
2.84 HITS PER LINE
Source Files on download-seqs
Coverage ∆ File Lines Relevant Covered Missed Hits/Line Branch Hits Branch Misses

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
305 download-seqs Describe 'download:TAXID' input format in README Pull #27 web-flow travis-ci-com pending completion  
304 download-seqs Describe 'download:TAXID' input format in README push haydenm travis-ci-com pending completion  
301 download-seqs Add unit test for construct_influenza_genome_neighbors() This requires creating a mock function for fetch_influenza_genomes_table(), so that it does not need to be run. push haydenm travis-ci-com pending completion  
300 download-seqs Skip test for construct_neighbors_for_influenza() on Travis CI This integration test requires an FTP call, which Travis CI does not seem to permit. push haydenm travis-ci-com pending completion  
298 download-seqs Fix unit tests for encoded URLs In different Python versions, the order of the key=value pairs (separated by '&' characters) in the url can differ. This changes the unit tests to permit different orders. push haydenm travis-ci-com pending completion  
297 download-seqs Add ncbi_neighbors module This module contains functions for fetching genome neighbors and FASTA files from NCBI. push haydenm travis-ci-com pending completion  
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