biocore / kl-metapool

92%

master: 92%

LAST BUILD ON BRANCH beta

branch: beta

CHANGE BRANCH

x

Reset

Sync Branches

• beta
• 2025.05.1+beta
• 2025.05.2
• 2025.07.1
• 2025.07.2
• 2025.07.2+beta
• abs_quant_metag_11_load_support
• amplicon_fix
• centralize_sequencers
• config_location
• contains_replicates_hotfix
• deploy_more
• deploy_support
• deploy_support_1pt5
• deploy_support_1pt6
• deploy_support_2
• deploy_tweaks
• file_cleanup
• master
• metat_fix
• metatv0_back
• metatv0_fix
• minor-changes-062025
• notebook_patch
• notebook_testing
• pacbio
• pacbio_0829
• pacbio_0903
• pacbio_0905
• pacbio_0909
• pacbio_0910
• pacbio_0910_2
• profile_name
• rename
• replicate_fix_2
• sequencers_for_klp
• sequencers_for_qp_klp
• setup
• validate_sample_sheets_on_load

Build # 17180196510

Build Type

push

github

Committed by web-flow

Commit Message

Pacbio addition, Qiita dependence removal (#322)

* Remove unused Qiita dependence

* Remove unused imports

* Add pacbio sequencer and protocol info

* Remove trailing whitespace

Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>

* remove qiita from ci

* remove dependencies info from setup.py in favor of environment.yml

* remove deprecated setup.py develop usage

* exclude notebooks from importable install

* rejigger notebook exclusion

* modify version import

* remove init from notebooks

* try another setup approach

* add console scripts back to setup.py

* fix lint

* exclude _version.py

* Remove node.js set up

Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>

* remove manual conda create

Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>

---------

Co-authored-by: Amanda Birmingham <10677935+AmandaBirmingham@users.noreply.github.com>
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>

Run Details

45 of 61 new or added lines in 4 files covered. (73.77%)

26 existing lines in 1 file now uncovered.

6439 of 6989 relevant lines covered (92.13%)

0.92 hits per line