biocore / kl-metapool

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• master
• 2025.05.1+beta
• 2025.05.2
• 2025.07.1
• 2025.07.2
• 2025.07.2+beta
• 2025.11.1+beta
• _find_filtered_files-trimmed_sequences
• abs_quant_metag_11_load_support
• amplicon_fix
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• change_sample_id_col_name
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• pacbio_0829
• pacbio_0903
• pacbio_0905
• pacbio_0909
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• pacbio_samplesheet_ll
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• remove_strict
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• replicate_fix_2
• sequencers_for_klp
• sequencers_for_qp_klp
• setup
• string_constants
• update_to_py3_10
• validate_sample_sheets_on_load

Build # 19579448435

Build Type

push

github

Committed by web-flow

Commit Message

Temporary pacbio sample sheet builder notebook (#350)

* initial  pacbio notebook

* wip pacbio sample sheet builder

* add check for duplicate project names

* wip: test pacbio_sample_sheet_builder

* passing pacbio samplesheet tests

* delete copy-pasted comments, add more instructions

* remove user-specific dir

* code review fixes, sort to stabilize order output in tests

* code review fix for exp_design)_desc, add date-zeroing to tests

Run Details

71 of 83 new or added lines in 2 files covered. (85.54%)

6520 of 7042 relevant lines covered (92.59%)

0.93 hits per line