biocore / kl-metapool

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master: 93%

LAST BUILD ON BRANCH 2025.11.1+beta

branch: 2025.11.1+beta

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• 2025.11.1+beta
• 2025.05.1+beta
• 2025.05.2
• 2025.07.1
• 2025.07.2
• 2025.07.2+beta
• _find_filtered_files-trimmed_sequences
• abs_quant_metag_11_load_support
• amplicon_fix
• beta
• centralize_sequencers
• change_sample_id_col_name
• config_location
• contains_replicates_hotfix
• deploy_more
• deploy_support
• deploy_support_1pt5
• deploy_support_1pt6
• deploy_support_2
• deploy_tweaks
• file_cleanup
• machine_prefix_addition
• master
• metat_fix
• metatv0_back
• metatv0_fix
• minor-changes-062025
• notebook_patch
• notebook_testing
• pacbio
• pacbio_0829
• pacbio_0903
• pacbio_0905
• pacbio_0909
• pacbio_0910
• pacbio_0910_2
• pacbio_20251014
• pacbio_samplesheet_ll
• pacbio_temp_notebook
• pacbio_unittests
• profile_name
• remove_strict
• rename
• replicate_fix_2
• sequencers_for_klp
• sequencers_for_qp_klp
• setup
• string_constants
• update_to_py3_10
• validate_sample_sheets_on_load

Build # 19581114076

Build Type

push

github

Committed by web-flow

Commit Message

Temporary pacbio sample sheet builder notebook (#350)

* initial  pacbio notebook

* wip pacbio sample sheet builder

* add check for duplicate project names

* wip: test pacbio_sample_sheet_builder

* passing pacbio samplesheet tests

* delete copy-pasted comments, add more instructions

* remove user-specific dir

* code review fixes, sort to stabilize order output in tests

* code review fix for exp_design)_desc, add date-zeroing to tests

Run Details

71 of 83 new or added lines in 2 files covered. (85.54%)

5 existing lines in 1 file now uncovered.

6524 of 7042 relevant lines covered (92.64%)

0.93 hits per line