angelolab / ark-analysis

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• gh-readonly-queue/main/pr-978-675a7e1f2ee3c8faa16a69800ee2271d355474a0
• master
• update_docker_script
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• integrated_plotting
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• integrated_plotting_function
• test_utils
• dist_mat_index
• contributing_guidelines
• line-length-fix
• deepcell-task
• context_spatial
• sphinx_style
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• regionprops_extension
• nbsphinx_delete
• boxplot_func
• dim_red_clean
• doc_org
• doc_org_redux
• pypi_setup
• modify_nuc_labels
• binning_labels_part_2
• initial_deploy
• v0.2.4
• pypi_debug
• v0.2.5
• pypi_name
• v0.2.6
• virt_env_doc
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• global-settings
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• point_remove
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• req_ranges
• verify_refactor
• close_num_fix
• combined-notebook
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• bump_version
• marker_verify
• load_utils_fix
• channel_unsort
• ngreenwald-patch-1
• tiff_ext
• v0.2.7
• neighbor_notebook
• pypi_bugfix
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• plot_utils_clean
• v0.2.8
• rescale_deepcell_input
• bump_kiosk
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• v0.2.11
• docker_windows_doc_fix_sri
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• som_updates
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• pixel_mask_boost
• som_memory
• readd_docker_update
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• readme_build_fix
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• external_drive_docker_docs
• metacluster_width
• cell_label_add
• fiber-segmentation
• flex_som_map
• fov_name_parsing_fix
• fov_masks_separate_dir
• pix_preprocessing
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• condence_cluster_data
• m1_ark_setup
• pixel_som_verify_fix
• feature/release_drafter
• parallel_som
• default_zip
• iterable_dtypes_fix
• deepcell_json_decode
• empty_seg_mask
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• 0.3.0
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• v0.3.2
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• load_utils_float_conversion_warning
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• v0.4.0
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• dist-lim-correction
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• core_fix
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• multiarch_docker
• kmeans_neighborhood_nb_update
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• local-updating
• nuclear_counts_false
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• next_release_v0.4.2
• pixel_mask_index
• unbatch_cell_table
• unbatch_mask_gen
• spatial_enrichment_loading
• templates_rename
• cluster_mask_speed
• example_dataset/nb2
• condense_label_save
• v0.4.2
• settings_name_update
• docker_start_add
• arrow_patch
• unbatch_spatial
• rtd_path
• pypi_req_fix
• next_release_v0.4.3
• neighborhood_progress
• v0.4.3
• example_dataset/nb3
• optimize_df_merging
• example_dataset/nb4
• example_dataset/merged_dataset
• remove_MIBItiff
• remove_mibitiff_in_notebooks
• patch_tests
• add_single_proc
• notebook_update_test_bash_cmd
• example_dataset/caching
• kmeans_nh_no_excluded_channels_fix
• notebook_tests
• example_dataset/local_caching
• validate_paths_usage
• optimization/compressed_csvs
• adjust_load_tiled_imgs
• tiff_standard
• next_release_v0.4.4
• refactor_dist_mat
• v0.4.4
• ci/wheel_building
• docs/cell_table_info
• pixie_authorship
• feature_0_1
• patch_mask_gen
• patch_kmeans_min
• ome_tiff
• subset_channel_avg
• neigh_index
• tmi/utils
• example_dataset/overwrite_existing_docs
• mantis/generalize_seg_mask_suffix
• example_dataset/spatial_analysis
• kmeans_seed
• create_mantis_proj_dup
• git_install_instructions
• py_consensus
• input_validation
• mixing_score
• mantis/img_suffix
• seg_dir_cluster
• pixie_clean
• pyflowsom_add
• readme/pipeline_flowchart/pixie
• mantis_seg_suffix
• colorbar_scale
• example_dataset/cropped_fov0
• v0.5.0
• next_release_v0.5.0
• load_utils/load_tif
• pixie/filter_with_nuclear_mask
• preprocess_pixie_cell
• zero_col_cell
• 883-unable-to-create-overlay-image-using-mesmer-output-tiff-and-input-tiff-images
• next_release_v0.5.1
• v0.5.1
• start_cell_cluster
• remove_deterministic
• cell_99
• cell_table_slow
• z_slider_fix
• retrain_pixel_som
• propagate_fovs
• gh-readonly-queue/main/pr-894-a4b2841ce9600938f2f8e6aee04e925008c10858
• dependabot/pip/docs/ipython-8.10.0
• gh-readonly-queue/main/pr-908-1f3859f53982d9c1dece38f92af570d99b8b4466
• 857-refactor-mask-generation
• cbar_minor_ticks
• overwrite_option
• gh-readonly-queue/main/pr-935-39089035bea2d2167380f0b22881d8f9b4a3f515
• gh-readonly-queue/main/pr-942-7b37816d667c39e4fbad124a22fe273a69728520
• gh-readonly-queue/main/pr-951-ad4e42fd7bf84a971b9719618b073d887746f6c8
• gh-readonly-queue/main/pr-953-8293e1fbf57ea22cb59a09fa46d61a461f57d5ed
• gh-readonly-queue/main/pr-955-f9a412b454ec0e25e336cd99607312b89776ece9
• gh-readonly-queue/main/pr-946-f6e0d2a56b0231502fc61cf0a65ce2d7a2d6b644
• gh-readonly-queue/main/pr-959-8e5366783c2ae5b26ff9cad32f2a198f841815f5
• gh-readonly-queue/main/pr-960-68a3d954090f6ec36d066bca4928e32772b390db
• gh-readonly-queue/main/pr-939-8d28c2cdcc76eded9a9da4a81b1e5ee2b5424ece
• gh-readonly-queue/main/pr-966-ac64b0e8b6e3df54de30e5a9fc20f5d132b51fed
• gh-readonly-queue/main/pr-983-061a128886947bf3b0c22f30623fb6e0fe5e647e
• gh-readonly-queue/main/pr-981-dc9854979077335b04af85a0030f301bb2d7365b
• gh-readonly-queue/main/pr-973-79177931bdfaa98cae63b0a33c6aee289f93fc9a
• fix_np_float
• mask_index_fix
• gh-readonly-queue/main/pr-994-aa4f11452cf1b2dbdb93fb0d1378aabc892cedd3
• gh-readonly-queue/main/pr-998-cb8084748a94e9004e9685075cdf8e7d783814d3
• gh-readonly-queue/main/pr-1006-d547efb338cda0f2948052efd6045392632fd9ac
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• gh-readonly-queue/main/pr-993-c0c31edac976dbb6ecda5d101de1cbd3a880cc78
• meta_dup
• gh-readonly-queue/main/pr-999-e663b04156d6b5e299d33a48dfc3314df6601d5d
• gh-readonly-queue/main/pr-991-2af302d202e64c63d0a19bc0fba40527302adca5
• gh-readonly-queue/main/pr-1011-5acbee26a2b698fc47d2a0c3428f35ad115e4200
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• gh-readonly-queue/main/pr-1012-67a1a589c35485d7a534f87c1b48393a3681fff7
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• gh-readonly-queue/main/pr-1033-82b93128fc98fbe2d9a3d867ea2dfeb7c552fc44
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• gh-readonly-queue/main/pr-1051-963763fd11afcd58f76bc187126c212fd3d52025
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• gh-readonly-queue/main/pr-1123-8877213489a5c35e825cbcaa2a5140ebfdbe6f6f
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• gh-readonly-queue/main/pr-1092-51dd1c42c7c215cdcd6140765ec42ec08ec5370d
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• gh-readonly-queue/main/pr-1158-cb8ccdb9c18ab8b8287149f0ab13eeb3366d3593
• docker_doc_deprecate

Kmeans plotting cell border fix (#978)