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• git_install_instructions
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• google-drive-documentation
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• landing_doc
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• line-length-fix
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• load_utils/load_tif
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• local-updating
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• low_contrast_warning
• m1_ark_setup
• main
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• mantis/img_suffix
• mantis_assign_cells
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• marker_verify
• mask_index_fix
• master
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• metacluster_gui
• metacluster_width
• mibilib-workaround
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• mixing_score
• modify_nuc_labels
• morph_add
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• move_meta_rename
• multiarch_docker
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• neighborhood_progress
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• next_release_v0.4.1
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• ngreenwald-patch-1
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Build # 3128

Build Type

push

travis-ci-com

Committed by web-flow

Commit Message

Extraction options (#355)

* adds option for selecting extraction function

* updates tests for signal extraction

* adds markerquant test

* documentation fix

* adds newline for correct docstring formating

* adds example to notebook

* adds higher level testing for extraction function calls

* removes example calls to positive pixel extraction in segmentation notebook

* removes test expecting error

* updates default extraction name and refactors kwarg access

* uses less hacky io sanitation for marker quant regionprops

Run Details

1046 of 1059 relevant lines covered (98.77%)

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