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angelolab / ark-analysis
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LAST BUILD BRANCH: main
DEFAULT BRANCH: master
Repo Added 14 Aug 2020 04:22PM UTC
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LAST BUILD ON BRANCH v0.2.7
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  • v0.2.7
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  • 857-refactor-mask-generation
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  • gh-readonly-queue/main/pr-999-e663b04156d6b5e299d33a48dfc3314df6601d5d
  • git_install_instructions
  • github-actions-from-template
  • global-settings
  • google-drive-documentation
  • google-drive-hotfix
  • google-drive-integration
  • ignore_hidden_files
  • improve_jupyter_launch
  • initial_deploy
  • input_validation
  • integrated_plotting
  • integrated_plotting_function
  • integrated_plotting_functions
  • ipympl_fix
  • iter_viz
  • iterable_dtypes_fix
  • jitter_signal
  • jupyter_lab
  • k_means
  • k_means_mat
  • kmeans_neighborhood_nb_update
  • kmeans_nh_no_excluded_channels_fix
  • kmeans_seed
  • landing_doc
  • lda_metrics
  • line-length-fix
  • line_length
  • load_tree_wrong_chan_name
  • load_utils/load_tif
  • load_utils_fix
  • load_utils_float_conversion_warning
  • local-updating
  • localize-mibitiff
  • low_contrast_warning
  • m1_ark_setup
  • main
  • mantis/generalize_seg_mask_suffix
  • mantis/img_suffix
  • mantis_assign_cells
  • mantis_dir
  • mantis_seg_suffix
  • marker_verify
  • mask_index_fix
  • master
  • meta_dup
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  • metacluster_gui
  • metacluster_width
  • mibilib-workaround
  • mibitiff-throw-error
  • mibitiff_cell_mat
  • mixing_score
  • modify_nuc_labels
  • morph_add
  • morph_doc
  • morph_index_fix
  • move_meta_rename
  • multiarch_docker
  • nbsphinx_delete
  • neigh_index
  • neighbor_notebook
  • neighborhood_progress
  • new_cluster_boost
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  • new_som
  • next_release_v0.4.1
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  • ngreenwald-patch-1
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  • no-contrast-check
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  • pixel_overlay_patch
  • pixel_path_fix
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  • pixie/filter_with_nuclear_mask
  • pixie_authorship
  • pixie_clean
  • plot_clustering_result
  • plot_overlay_fix
  • plot_utils_clean
  • point_remove
  • post_clustering
  • preprocess_pixie_cell
  • processing_branch
  • prog-bar-fix
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  • propagate_fovs
  • py_consensus
  • pyflowsom_add
  • pypi_bugfix
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  • python_3.7_version_download_fix
  • qc_metric_moly
  • qc_metrics
  • r_som
  • rand_mod
  • readd_docker_update
  • readme-clarification
  • readme/pipeline_flowchart/pixie
  • readme_badges
  • readme_build_fix
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  • rebuild_docker
  • refactor_dist_mat
  • regionprops_extension
  • regionprops_sanitization
  • remap
  • remove_MIBItiff
  • remove_deterministic
  • remove_file_extension_fix
  • remove_googledrivepath_dead_code
  • remove_manual_clustering_nb
  • remove_mibi_dir
  • remove_mibitiff_in_notebooks
  • remove_rplots
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  • req_ranges
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  • rescale_deepcell_input
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  • spatial-analysis-fov-batching
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  • spatial-memory-cleanup
  • spatial_LDA
  • spatial_LDA_viz
  • spatial_enrichment_loading
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  • spatial_utils_clean
  • speed_tests
  • sphinx_setup
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  • split_nuclei_bugfix
  • split_som_modules
  • start-docker-upgrade
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  • stitch_test
  • subcellular_loc_notebook
  • subset_channel_avg
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  • substr-matching
  • substr_fix
  • syn_data_clean
  • template_developer_flag
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  • tiff_ext
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  • v0.2.10
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  • validate_path_update
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pending completion
2249

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travis-ci-com

web-flow
Bump version number and ensure requirements.txt are installed properly on pip install (#273)

* Add initial pass of new config parameters to install requirements as well as ark-analysis on a pip install

* Actually need to import setuputils

* Add setup requirements for numpy

* Minor fixes (hopefully Segment_Images doesn't take forever to build)

* Add mibilib dependency to setup.py and python setup.py install to .travis.yml

* Fix version number

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Builds Branch Commit Type Ran Committer Via Coverage
2249 v0.2.7 Bump version number and ensure requirements.txt are installed properly on pip install (#273) * Add initial pass of new config parameters to install requirements as well as ark-analysis on a pip install * Actually need to import setuputils *... push 16 Oct 2020 08:10PM UTC web-flow travis-ci-com pending completion  
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