broadinstitute / viral-ngs / 1030

Builds Branch Commit Type Ran Committer Via Coverage
1030 lk-bulk_assemble_denovo actually put it back the way it was push lakras travis-ci-com pending completion   set done
1029 lk-bulk_assemble_denovo put it back the way it was push lakras travis-ci-com pending completion   set done
1028 lk-bulk_assemble_denovo trying adding scatter around entire assemble_denovo process push lakras travis-ci-com pending completion   set done
1027 lk-bulk_assemble_denovo handle when gatk jar is in subdir (#997) * handle when gatk jar is in subdir gatk 3.8-1 is packed as a bz2 such that when extracted the jar file is found within a subdirectory, in contrast to earlier versions where it is at the top level. This... push web-flow travis-ci-com pending completion   set done
1025 ct-add-clumpify set bbmap jvmMemDefault='2g'; 1g for clumpify test push tomkinsc travis-ci-com pending completion   set done
1026 ct-add-clumpify set bbmap jvmMemDefault='2g'; 1g for clumpify test Pull #970 web-flow travis-ci-com pending completion   set done
1024 ct-add-clumpify update stage number Pull #970 web-flow travis-ci-com pending completion   set done
1023 ct-add-clumpify update stage number push tomkinsc travis-ci-com pending completion   set done
1022 ct-add-clumpify Merge branch 'ct-add-clumpify' of ssh://github.com/broadinstitute/viral-ngs into ct-add-clumpify Pull #970 web-flow travis-ci-com pending completion   set done
1021 ct-add-clumpify Merge branch 'ct-add-clumpify' of ssh://github.com/broadinstitute/viral-ngs into ct-add-clumpify push tomkinsc travis-ci-com pending completion   set done
1020 ct-add-clumpify Merge branch 'master' into ct-add-clumpify Pull #970 web-flow travis-ci-com pending completion   set done
1019 ct-add-clumpify Merge branch 'master' into ct-add-clumpify push web-flow travis-ci-com pending completion   set done
1016 master handle when gatk jar is in subdir (#997) * handle when gatk jar is in subdir gatk 3.8-1 is packed as a bz2 such that when extracted the jar file is found within a subdirectory, in contrast to earlier versions where it is at the top level. This... push web-flow travis-ci-com pending completion   set done
1014 ct-gatk-wdl-locate alternative way of moving jar alternative way of moving jar, since womtool seems to dislike using find's '{}' as the string to substitute push tomkinsc travis-ci-com pending completion   set done
1015 ct-gatk-wdl-locate alternative way of moving jar alternative way of moving jar, since womtool seems to dislike using find's '{}' as the string to substitute Pull #997 web-flow travis-ci-com pending completion   set done