jeremymcrae / clinical-filter / 107

Builds Branch Commit Type Ran Committer Via Coverage
107 master added unit test for get_parental_var method push jeremymcrae travis-ci pending completion   set done
106 master added unit test for analyse_trio method of Filter class push jeremymcrae travis-ci pending completion   set done
105 master added unit tests for TrioGenotypes getter methods push jeremymcrae travis-ci pending completion   set done
104 master fix a unit test bug due to unsorted list in python3 push jeremymcrae travis-ci pending completion   set done
103 master refactored TrioGenotypes and Inheritance classes - Inheritance class is now constructed with a single known gene dictionary entry, rather than the full dictionary of all known genes. This can be None if the gene is not known. - removed add_va... push jeremymcrae travis-ci pending completion   set done
102 master test that we can't find a MAF value if the SNV populations are unavailable push jeremymcrae travis-ci pending completion   set done
101 master remove bug with unit testsing when the test order differs push jeremymcrae travis-ci pending completion   set done
99 master removed coding_sequence_variant as a loss-of-function type push jeremymcrae travis-ci pending completion   set done
98 master fixbug in helper script push jeremymcrae travis-ci pending completion   set done
97 master removed unused class, don't add variable to Filter class push jeremymcrae travis-ci pending completion   set done
96 master removed LoadOptions class, moved code into Filter class. Tidied up Filter object construction, and tweaked running through families. push jeremymcrae travis-ci pending completion   set done
95 master update helper script to modify conserved last base of exons by default push jeremymcrae travis-ci pending completion   set done
94 master update helper scripts to use ped loading functions push jeremymcrae travis-ci pending completion   set done
93 master add test for when the info doesn't contain any symbols push jeremymcrae travis-ci pending completion   set done
92 master catch missing symbol, and avoid raising error with discrepant symbol list lengths push jeremymcrae travis-ci pending completion   set done