broadinstitute / hellbender / 204

Builds Branch Commit Type Ran Committer Via Coverage
204 dr_dynamic_window_in_referencecontext Allow reference window in ReferenceContext objects to be set dynamically by tools Some tools need to dynamically resize the reference context window based upon other input. This commit exposes a setWindow() method to allow tools to do this. -To ... push droazen travis-pro pending completion   set done
202 lb_unix_style_options Major changes to the command line parsing system -using jopt-simple to do the actual parsing -supports short (-h) and long (--help) styles -supports boolean flags with or without an argument -options are now case sensitive -argument collections ca... push lbergelson travis-pro pending completion   set done
203 master Major changes to the command line parsing system -using jopt-simple to do the actual parsing -supports short (-h) and long (--help) styles -supports boolean flags with or without an argument -options are now case sensitive -argument collections ca... Pull #135 lbergelson travis-pro pending completion   set done
201 lb_unix_style_options Major changes to the command line parsing system -using jopt-simple to do the actual parsing -supports short (-h) and long (--help) styles -supports boolean flags with or without an argument -options are now case sensitive -argument collections ca... push lbergelson travis-pro pending completion   set done
200 lb_unix_style_options in progress work on parsing push lbergelson travis-pro pending completion   set done
198 lb_unix_style_options Updating tests to use new style commmand lines push lbergelson travis-pro pending completion   set done
194 master Merge pull request #127 from broadinstitute/jt_typo Typo: Grade -> Gradle push akiezun travis-pro pending completion   set done
193 master Typo: Grade -> Gradle Pull #127 jmthibault79 travis-pro pending completion   set done
192 jt_typo Typo: Grade -> Gradle push jmthibault79 travis-pro pending completion   set done
189 master Merge pull request #126 from broadinstitute/dr_add_intellij_setup_to_readme Add IntelliJ setup instructions to the README push akiezun travis-pro pending completion   set done
191 ak_bqsr_part2 removing threadlocals push akiezun travis-pro pending completion   set done
187 dr_add_intellij_setup_to_readme Add IntelliJ setup instructions to the README Resolves #108 push droazen travis-pro pending completion   set done
188 master Add IntelliJ setup instructions to the README Resolves #108 Pull #126 droazen travis-pro pending completion   set done
186 dr_add_intellij_setup_to_readme Add IntelliJ setup instructions to the README Resolves #108 push droazen travis-pro pending completion   set done
185 dr_add_intellij_setup_to_readme Add IntelliJ setup instructions to the README Resolves #108 push droazen travis-pro pending completion   set done