204
64%
master: 81%

Ran 21 Jan 2015 08:59PM UTC

Jobs 1

Files 138

Run time 1min

Badge

Embed ▾

pending completion

Build # 204

Build Type

push

travis-pro

Committed by

droazen

Commit Message

Allow reference window in ReferenceContext objects to be set dynamically by tools

Some tools need to dynamically resize the reference context window based upon other
input. This commit exposes a setWindow() method to allow tools to do this.

-To change the reference context size, tools should invoke setWindow() on the
 ReferenceContext provided by the engine before invoking getBases()/getBasesIterator().

-Hopefully eliminates the need for tools to create their own reference readers

-ReferenceContext still caches previous query results, but cache gets invalidated
 every time the window size changes.

Resolves #131

Run Details

7531 of 11822 relevant lines covered (63.7%)

0.64 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	204.1 (TERM=dumb)	21 Jan 2015 08:59PM UTC	0	63.7	Travis Job 204.1

Source Files on build 204

Detailed source file information is not available for this build.

broadinstitute / hellbender / 204
64%
master: 81%

README BADGES
x

Markdown

Textile

RDoc

HTML

Rst

Jobs

Source Files on build 204

broadinstitute / hellbender / 204 64% master: 81%

README BADGES x

Markdown

Textile

RDoc

HTML

Rst

Jobs

Source Files on build 204

broadinstitute / hellbender / 204
64%
master: 81%

README BADGES
x