bioperl / bioperl-live / 937

Builds Branch Commit Type Ran Committer Via Coverage
937 master Bio::DB::CUTG: move into its own distribution push carandraug travis-ci pending completion   set done
936 master Bio::DB::Taxonomy::sqlite: move into its own distribution This reduces dependency on the DBI module. Now we're only dependent on it because of 'bin/bp_classify_hits_kingdom' push carandraug travis-ci pending completion   set done
935 master Bio::DB::GFF move into its own namespace (except Bio::DB::GFF::Util) We don't move the Bio::DB::GFF::Util because it doesn't make use of the rest Bio::DB::GFF (it does not even expect them as arguments) and is used in Bio::SeqFeature::Collection. push carandraug travis-ci pending completion   set done
934 master Bio::DB::SeqFeature::* move namespace into its own distribution. push carandraug travis-ci pending completion   set done
933 master maint: update changes from 1f7b54a281a8 push carandraug travis-ci pending completion   set done
932 master Bio::Variation::* move namespace into its own distribution. Also move the program bin_flanks which although not actually using the Bio::Variation modules, it's to be used in the same context. push carandraug travis-ci pending completion   set done
931 master add SOFA as well push cjfields travis-ci pending completion   set done
930 master fix URLs, a number of these no longer work push cjfields travis-ci pending completion   set done
929 master Remove Bio::SeqIO support for abi, alf, ctf, exp, pln, and ztr. This trace files were wrappers to Bio::SeqIO::staden::read which is not even indexed in CPAN (it's in the bioperl-ext repository). So remove this modules and move into a separate di... push carandraug travis-ci pending completion   set done
928 master Bio::Cluster and Bio::ClusterIO moved to their own separate distribution push carandraug travis-ci pending completion   set done
927 master Bio::Phenotype::* move what's left of the namespace to its own distribution. Everything moved to its own distribution named Bio-Phenotype. One other module is nthis namespace was previously split out into the Bio-DB-MeSH distribution too. push carandraug travis-ci pending completion   set done
926 master maint: remove no longer used test data files. This files were used by the tests for the now removed Bio::LiveSeq modules. push carandraug travis-ci pending completion   set done
925 master Bio::LiveSeq::* move whole namespace to its own distribution. Everything moved to its own distribution named Bio-LiveSeq. The modules in this namespace are dependent on Bio::Variation. With this is a separate distribution, Bio::Variation can al... push carandraug travis-ci pending completion   set done
924 master maint: update gitignore rules We are now using dzil which runs everything inside its .build dir. So no longer ignore a bunch of stuff. push carandraug travis-ci pending completion   set done
923 master maint: restructure to use Dist::Zilla * dist.ini: add to configure dzil. Makes use of our Dist Zilla BioPerl pluginbundle. * Bio/Root/Test.pm: use Test::RequiresInternet instead of the Module::Build used previously. * t/PodSyntax.t: remove... push carandraug travis-ci pending completion   set done