bioperl / bioperl-live / 970

Builds Branch Commit Type Ran Committer Via Coverage
970 master bp_chaos_plot: remove script (issue #323) * bin/bp_chaos_plot: remove scrit with problematic requirement on GD. * dist.ini: remove handling of GD dependency. * Changes: mention this change. push carandraug travis-ci pending completion   set done
969 master v1.7.6 * The program bp_classify_hits_kingdom has been removed and is now part of the examples documentation instead. * GD is now listed as a suggestion instead of a requirement. The bp_chaos_plot program will now work with ... push carandraug travis-ci pending completion   set done
968 master maint update Changes file push carandraug travis-ci pending completion   set done
967 master reduce warnings from PERL5OPT=-M-indirect prove -lr t push cjfields travis-ci pending completion   set done
966 master Changes: more details and philosophy are on HACKING and README push carandraug travis-ci pending completion   set done
965 master Changes: more detailed complete list of modules/dependencies added/removed Simply list all modules and dependencies that have been removed and added for this new release. The list of modules goes more in line with what the users should focus on,... push carandraug travis-ci pending completion   set done
964 master lib/BioPerl.pm: start conversion of POD to make use of PodWeaver We have PodWeaver in our dzil plugin bundle but it's disabled because PodWeaver expects a minimum annotation. Set it up so we can start the migration one file a time. push carandraug travis-ci pending completion   set done
963 master bin/bp_biofetch_genbank_proxy: move to Bio-DB-NCBIHelper push carandraug travis-ci pending completion   set done
962 master Bio::DB::SwissProt: move to its own distribution push carandraug travis-ci pending completion   set done
961 master Bio::DB::BioFetch: move to its own distribution push carandraug travis-ci pending completion   set done
960 master Automatic handling of VERSION in all modules (issue #283) Don't manually assign to $VERSION since dzil PkgVersion plugin does that for us. It does that for all modules so there's no longer a need to have system to synchronize (like Bio::Root::Ve... push carandraug travis-ci pending completion   set done
959 master t/SeqFeature/Generic.t: fix failing tests (fixup fde603f22aa) Skip one more block of tests if Bio::DB::GenBank is not available. push carandraug travis-ci pending completion   set done
958 master bin/bp_fetch: move require of optional modules where they are used This program can make use of some Bio::DB modules which have been moved into their own distribution. They can improve this program so we also mark them as suggestions. Not sure ... push carandraug travis-ci pending completion   set done
957 master Bio::Map::* and Bio::MapIO::* : move into their own distribution. push carandraug travis-ci pending completion   set done
956 master Remove manipulation of @INC and use of lib - require install for use. Some scripts manipulated @INC so they could be ran without installation. Undo this, we expect users to have it installed. The authoring and installation step of BioPerl modifi... push carandraug travis-ci pending completion   set done