bioperl / bioperl-live / 890

Builds Branch Commit Type Ran Committer Via Coverage
890 master Bio/Restriction/*: move to another repo with same name. Remove this into another repo named Bio-Restriction to be released on its own, in a distribution with the same name. push carandraug travis-ci pending completion   set done
889 master Bio/Tools/Gel.pm: move to another repo with same name. Remove this into another repo named Bio-Tools-Gel to be released on its own, in a distribution with the same name. push carandraug travis-ci pending completion   set done
888 master Bio/SeqEvolution/*: move to another repo with same name. Remove this into another repo named Bio-SeqEvolution to be released on its own, in a distribution with the same name. push carandraug travis-ci pending completion   set done
887 master Bio/Structure/*: move to another repo with same name. Remove this into another repo named Bio-Structure to be released on its own, in a distribution with the same name. push carandraug travis-ci pending completion   set done
886 master t/data: remove more test data files which moved to Bio-Assembly push carandraug travis-ci pending completion   set done
885 master Bio/Assembly*: move to another repo with same name. Remove this into another repo named Bio-Assembly to be released on its own, in a distribution with the same name. This drops BioPerl dependency on Bio-SamTools and Sort::Naturally. It also make... push carandraug travis-ci pending completion   set done
884 master Bio/PhyloNetwork*: move to another repo with same name. Remove this into another repo named Bio-PhyloNetwork to be released on its own, in a distribution with the same name. This drops BioPerl dependency on Algorithm-Munkres, GraphViz, and Array... push carandraug travis-ci pending completion   set done
883 master Bio/SeqIO/excel.pm: move to another repo with same name. Remove this into another repo named Bio-SeqIO-excel to be released on its own, in a distribution with the same name. This drops BioPerl dependency on Spreadsheet-ParseExcel. push carandraug travis-ci pending completion   set done
882 master Bio/TreeIO/svggraph.pm: move to another repo with same name. Remove this into another repo named Bio-TreeIO-svggraph to be released on its own, in a distribution with the same name. This drops BioPerl dependency on SVG-Graph and Tree-DAG_Node. push carandraug travis-ci pending completion   set done
881 master Bio/Tree/Draw/Cladogram.pm: move to another repo with same name. Remove this into another repo named Bio-Tree-Draw-Cladogram to be released on its own, in a distribution with the same name. This drops BioPerl dependency on PostScript. push carandraug travis-ci pending completion   set done
880 master Move all modules interfacing to ACeDB servers to a new Bio-DB-Ace distribution. Move this modules into new repo Bio-DB-Ace to be released as a new distribution with the same name. This interface has been deprecated since 2011 (according to Build... push carandraug travis-ci pending completion   set done
879 master Move all NeXML related modules and tests to a new Bio-NeXMLIO distribution. The NeXML related modules are scattered through the Bio namespace but still compose a modular unit. Remove them and their tests. They are now in a new bioperl repo name... push carandraug travis-ci pending completion   set done
878 master Remove entire Bio::PopGen namespace and related modules, scripts, and test These are a modular unit so they are now a separate repo named Bio-PopGen (not yet released). The Bio::Tree::AlleleNode has also been moved since it is related to Bio::Po... push carandraug travis-ci pending completion   set done
877 master scripts/tree/bp_blast2tree.pl: moved to bioperl-run Added to the bioperl-run repo with commit 1e15384ae33b push carandraug travis-ci pending completion   set done
876 master deobfuscator: remove this whole project Abandoned, unmaintained, and no longer live. As far as we know, no one uses it. If one needs revival, it should go into a project of its own. Can also be replaced by using Pod::Weaver to generate the docs. push carandraug travis-ci pending completion   set done