MikkelSchubert / adapterremoval / #117

Builds Branch Commit Type Ran Committer Via Coverage
#117 master iwyu and reduce build-time inter-dependencies (#144) push web-flow travis-ci
66.93
#116 master enable -Wshadow-local and fix warnings (#143) push web-flow travis-ci
67.01
#115 master update documentation (#142) The documentation is still a work in progress, but this moves it significantly closer to being ready for the final release of v3. push web-flow travis-ci
67.04
#114 master update version numbers (#141) push web-flow travis-ci
67.04
#113 master rename '--mixed-orientation' to '--barcode-orientation' (#139) push web-flow travis-ci
67.04
#112 master enable hardening by default (#138) This comes at a small performance cost, but it is expected that many distros will be enabling similar flags by default. Flags updated (mostly) based on -fhardening push web-flow travis-ci
67.04
#111 master fix misleading io error messages (#137) In particular, errors without assosiated error codes would include nonsensical error descriptions. The use of ios_base::failure is dropped, since IO generally is not done using iostreams push web-flow travis-ci
67.04
#110 master improve estimation of gzip buffer capacity needs (#136) This reduces the amount of allocations and fixes compression failures when using --compression-level 1 push web-flow travis-ci
66.99
#109 master use mold for linking in github action (#135) This significantly speeds up build times push web-flow travis-ci
67.02
#108 master trim --help preamble and link to RTD (#134) push web-flow travis-ci
67.02
#107 master fix misleading errors for non-ACGT barcodes (#133) Previously, an IUPAC encoded degenerate bases or uracils (U) would trigger a suggestion to use the command-line options for masking these bases push web-flow travis-ci
67.02
#106 master gather phred<->p code and fix reported mott value (#132) push web-flow travis-ci
67.0
#105 master avoid undefined behavior when stringifying enums (#131) It is not completely clear to me what is allowed, based on the spec, so playing it safe push web-flow travis-ci
66.93
#104 master rename sample::add to sample::add_barcodes (#130) push web-flow travis-ci
66.96
#103 master include barcode orientation in HTML/JSON reports (#129) This implements part of #68 push web-flow travis-ci
66.96