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broadinstitute / viral-ngs / 132 / 6
23%
master: 23%

Build:
DEFAULT BRANCH: master
Ran 31 Jan 2019 02:05AM UTC
Files 42
Run time 4s
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31 Jan 2019 02:00AM UTC coverage: 31.011% (-0.7%) from 31.708%
TRAVIS_JOB=test_snakemake

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add function to assist Illumina index correction (#917)

* add functions to assist with Illumina index correction

illumina.py::guess_barcodes

* add basic tests related to barcode correction

* include outlier barcode detection and guessing as part of WDL pipeline

* include outlier barcode detection and guessing as part of snakemake pipeline

* missing comma

* float cast

* add --expected_assigned_fraction=0 to guess_barcodes call in WDL

424 of 2820 branches covered (15.04%)

2114 of 6817 relevant lines covered (31.01%)

0.31 hits per line

Source Files on job 132.6 (TRAVIS_JOB=test_snakemake)
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