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broadinstitute / viral-ngs / 132
23%

Build:
DEFAULT BRANCH: master
Ran 31 Jan 2019 02:05AM UTC
Jobs 2
Files 42
Run time 5min
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add function to assist Illumina index correction (#917)

* add functions to assist with Illumina index correction

illumina.py::guess_barcodes

* add basic tests related to barcode correction

* include outlier barcode detection and guessing as part of WDL pipeline

* include outlier barcode detection and guessing as part of snakemake pipeline

* missing comma

* float cast

* add --expected_assigned_fraction=0 to guess_barcodes call in WDL

396 of 2792 branches covered (14.18%)

172 of 172 new or added lines in 3 files covered. (100.0%)

2114 of 6817 relevant lines covered (31.01%)

1.04 hits per line

Jobs
ID Job ID Ran Files Coverage
5 132.5 (TRAVIS_JOB=test_py36) 31 Jan 2019 02:11AM UTC 0
74.67
Travis Job 132.5
6 132.6 (TRAVIS_JOB=test_snakemake) 31 Jan 2019 02:05AM UTC 0
31.01
Travis Job 132.6
Source Files on build 132
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