broadinstitute / viral-ngs / 6815 / 5

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travis-ci

Adding commands for working with kmer sets using the KMC tool. (#854)

Adding commands for working with kmer sets using the KMC tool.  Some planned uses: recovering currently depleted but relevant reads; evaluating optimality of assemblies and finding potentially fillable gaps; generating fine-grained reports on the occurrence in the known reference sequences of raw read kmers.

2539 of 4190 branches covered (60.6%)

7233 of 9675 relevant lines covered (74.76%)

0.75 hits per line