broadinstitute / viral-ngs / 6821 / 5
23%
master: 23%

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Run time 9s
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coverage: 73.871% (-0.9%) from 74.76%
TRAVIS_JOB=test_py36

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do not check for chromosome names in bam_is_sorted (#898)

set check_sq=False when opening a bam file in bam_is_sorted so we do not require chromosome names to be present

2497 of 4187 branches covered (59.64%)

7147 of 9675 relevant lines covered (73.87%)

0.74 hits per line

Source Files on job 6821.5 (TRAVIS_JOB=test_py36)