broadinstitute / viral-ngs / 6019 / 5
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master: 23%

Ran 22 Jun 2018 02:13PM UTC

Files 45

Run time 5s

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Committed 22 Jun 2018 01:47PM UTC coverage: 69.906% (+0.01%) from 69.895%

Job # TRAVIS_JOB=test_py36 PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util" BUNDLE_SECRET=[secure]

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push

travis-ci

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Commit Message

Merge pull request #791 from broadinstitute/ct-bwa-deplete-unpaired-tolerant

refactoring and optimizations related to bwa-based depletion

Run Details

6251 of 8942 relevant lines covered (69.91%)

0.7 hits per line

Source Files on job 6019.5 (TRAVIS_JOB=test_py36 PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util" BUNDLE_SECRET=[secure])