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broadinstitute / viral-ngs / 5991 / 5
23%
master: 23%

Build:
DEFAULT BRANCH: master
Ran 19 Jun 2018 08:22PM UTC
Files 45
Run time 9s
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19 Jun 2018 08:00PM UTC coverage: 69.895%. Remained the same
TRAVIS_JOB=test_py36 PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util" BUNDLE_SECRET=[secure]

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bugfix merge_bams reheader_table check (#824)

if reheader_table was omitted, reheader would be attempted anyway. This corrects the conditional so it is skipped if the file is not provided

6206 of 8879 relevant lines covered (69.9%)

0.7 hits per line

Source Files on job 5991.5 (TRAVIS_JOB=test_py36 PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util" BUNDLE_SECRET=[secure])
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