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feat(attachments): Update mongo documents to expose attachment deleted flag TASK-581 (#5788)

### 📣 Summary
Added `is_deleted` flag to attachments in Mongo to reflect deletion
status after attachment trash or restore actions.


### 📖 Description
This update ensures that the _attachments array stored in Mongo instance
documents accurately reflects the deletion status of each attachment.

This change ensures that:
- Each attachment in the `_attachments` array now includes an
`is_deleted` flag.
- The flag is automatically updated when attachments are moved to trash
or restored.
- This is implemented efficiently using Mongo `bulk_write()` operations.

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