vanvalenlab / deepcell-tf

72%

master: 86%

LAST BUILD ON BRANCH bugfix/metrics

branch: bugfix/metrics

CHANGE BRANCH

x

Reset

• bugfix/metrics
• testing
• master
• kiosk-training
• cleanup
• copyright
• documentation
• readme-fix
• tensorprod
• keras-preprocessing
• compress
• dense
• jupyterlab
• deepcell-post
• travis-cd
• notebooks
• disc
• recurr_gru
• accuracy_metrics
• datasets
• cell_tracking
• hela
• retinanet
• metric_refs
• featurepyramid
• cell_tracking-pep8
• mrcnn_test
• export-argmax
• enhance_retinanet_dvv
• willgraf/fpn
• bugfix/training-seeds
• featurepyramid-merge
• deepcell-dots
• metric_update
• normalization
• del-scripts
• feature/edge-switch
• enhance_retinanet_merge
• master-retinanet-fix
• master-edit
• upgradeTFver
• bugfix/test-size
• willgraf/README
• bugfix/export-list
• feature/modulify
• bugfix/training-path
• willgraf/test-models
• willgraf/cached-session
• willgraf/python2
• willgraf/bugfix-model
• bugfix/notebook-flags
• deepcell-tf-bugfix
• bugfix-retinanet
• bugfix/dilated-pool-3d
• bugfix/loss-test-sample-weight
• willgraf/test-callbacks
• willgraf/mibi-data
• willgraf/deprecate-tf1.8
• willgraf/tf-1.13
• datasets-wg
• label-scale-models
• willgraf/deprecate-running
• bugfix/readme-#191
• bugfix/pixelwise-train-notebook
• cell_tracking_merge
• bugfix/panoptic-notebook
• train_test_set_seed
• add_retina_movie
• ct-wg-master
• applications/tracking
• datasets-allcells
• cleanup-retinanet-gen
• bugfix/#215
• bugfix/218
• willgraf/multi-build
• 0.1.0
• tf-1.10
• willgraf/test-upsample
• mobilenet-backbones
• keras-applications
• bugfix/max-detections
• bugfix/travis-pytest
• ct_mordor_fix
• travis/conda
• fpn-include-top
• retinamovie-merge
• 0.2.0
• bugfix/networkx-version
• bugfix/slow-tests
• test-tf-1.14.0
• bugfix/pywt-1.1.1
• bugfix/225
• bugfix/219
• 0.3.0
• bugfix/249
• metrics-bbox-emfix
• tracking_docs_update
• deepcell_tracking
• reshape_matrix-fix
• willgraf/imgen
• bugfix/networkx
• update-deepcell-tracking
• travis-ci.com
• shape_mask_merge
• tf1.15
• bugfix/imgen-imports
• upgrade-tf1.14
• 0.4.0
• bugfix/tracking
• willgraf/auto-anchors
• tf.image.resize
• TCGA
• ngreenwald-patch-1
• bugfix/273
• metrics/f1
• layer_test/tf1.14
• willgraf/gru-test
• bugfix/clipboxes
• fix-build-arg
• add_conv_recurrent_layers
• add_temporal_to_featurenet3D
• manual_model_save
• pixel_transform_speedup
• bugfix/283
• temporal_training
• pixel_transform_bugfix
• bugfix/297
• mrgn-docs
• community-files
• 3d-layer-fix
• bugfix/302
• willgraf/docstrings
• tf-1.15.1
• contribution_guide
• dataset_update
• model-trainer
• willgraf/deep_watershed
• datasets_update
• willgraf/hashes
• license-badge
• gifs
• bugfix/docs-badge
• bugfix-FPN
• panoptic-mem
• metrics_labels
• bugfix-panoptic
• readme_update
• application-mrgn
• remove_windows_formatting
• bugfix-cyto-app
• update_panopticnet
• multiple_labels
• bugfix-app-resize
• update-weights
• correct_retinanet_generator
• tflite-export-utils
• update_centroid_transform
• correct_model_zoo_readme
• rename_maskrcnn_to_retinamask
• willgraf-readme-spacing
• fix_interpolation
• panoptic-notebook
• panoptic_tweaks
• multiplex_application
• bugfix/351
• bugfix/resize
• bump-toolbox
• simplify_transforms
• resize_bugfix
• bugfix/377
• willgraf/simplify-transforms
• harmonize_semantic_heads
• moved-metrics
• bugfix/skimage
• no-fgbg-nucapp
• bugfix/preprocessing
• remove-notebooks-module
• bugfix/README
• centroid_bugfix
• bugfix/app-resize
• bugfix/app-weights
• application_bugfix
• r0.5.0
• 0.5.0
• bugfix/readme
• willgraf-patch-1
• cole_test
• cropping_generator
• multiplex_application_update
• bugfix/keras-2.4
• 3D_updated
• smaller_transform_dtypes
• subcellular_segmentation_app
• pixelwise_transform_speedup
• 3D_nuclear_segmentation
• willgraf/tf2
• 3D_semantic_imagedatagenerator
• multiplex_application_notebook
• bugfix/opencv-version
• tf2_migration
• new_multiplex_model
• bugfix/multiplex-app
• hps
• tf2-deps
• migrate_preprocessing
• bump-version
• 0.6.0
• weights-hash
• HPS_postprocessing
• tf2_migration_updates
• bugfix/290
• bugfix/382
• bump-1.15.4
• bugfix/typo
• visualize_rgb_data
• willgraf/rm-resize-layer
• bugfix/28
• bugfix/445
• bugfix/losses-test
• willgraf/update-tests
• willgraf/layer-docstrings
• github-actions
• tf2-semantic-iterator
• bugfix/docker-workflow
• new_model_weights
• gha-docker-image-patch
• bump-0.7.0
• tf2-notebooks
• tf2-applications
• pip-package
• bugfix/docker
• bugfix/nuclear-model
• opencv-headless
• fixed_multiplex_weights
• app-resize-output-lists
• docs-warnings
• tf2_tracking
• deepcell-cpu
• update_tracking_app
• bugfix-app
• tf-2.4.1
• tf-2.3.2
• cicd
• opencv4
• bump-0.8.4
• skimage-17
• willgraf/version
• rm-retinanet
• applications-update
• bump-0.8.5
• bugfix-deepcell-cpu
• bugfix-skimage
• mixed-precision
• scale-detection
• semantic-3d-save-bug
• readme-caliban
• graphWork
• tracking-tests
• mesmer_name_update
• location-no-inshape
• bugfix-414
• revert-scale-label-models
• patch-0.8.7
• 0.8.x
• update-toolbox
• update-readme
• bugfix-setup-py
• graph_tracking
• inference-time-callback
• semantic-docs
• release-drafter
• willgraf-deepcell-data
• dependabot/pip/tensorflow-2.5.0
• crops-contain-objs
• app-override-pre-post
• cyto-app-reflect
• plot-model
• release-drafter-deps-label
• update-models-from-registry
• fix-515
• toolbox-10
• 0.9.x
• 0.9.1
• graph_tracking_rachel
• python-3-9
• graph_tracking_rd
• gha-cache
• graph_tracking_model
• graph_tracking_split
• graph_tracking_layers
• graph_tracking_arch_cleanup
• app_batching
• graph_tracking_notebook
• 0.9.x-bump-tf
• 0.9.2
• 0.8.x-tf-2.3.4
• tf-2.5.1
• 0.8.8
• fast_hole_filling
• 0.10-rc.1
• 0.10.0-rc.1
• bugfix-547
• tracking-updates
• tracking-app-model
• lr-is-deprecated
• tracking-attention
• update-tracking-app-models
• padded-tracking-data
• registry-datasets
• patch-0.10.1
• tracking-bugfix
• tracking-app-model-versions
• 0.10.x
• update-docs
• tracking-prepare-revert
• bugfix-559
• 0.10.2
• bump-version-0.11.0
• 0.11.0
• track_notebook
• tf-2.5.2
• tf-2.5.2-reqs
• revert-tf2.5.2
• Mesmer_paper_link
• docker-tests
• mrgn/model-update
• mrgn/numpy-version
• mrgn/test-os
• mrgn/graph-attention
• bump-0.11.1
• tracking_app_update
• mrgn/jinja2
• mrgn/mesmer-update
• mrgn/tf2.8
• 0.11.2
• 0.12.0rc
• mrgn/docker2.8
• 0.12.0rc1
• dvv/tfrecord
• mrgn/tracking-norm
• 0.12.0rc2
• mrgn/models
• 0.12.0
• dvv/tracking-tfr
• mrgn/tracking-metrics
• mrgn/0.12.1
• dvv/fix-tracking-model-bug
• dvv/modify-track
• 0.12.1
• mesmer_postprocess
• mrgn/matplotlib-bugfix
• 0.12.2
• mrgn/efficientnetv2
• bump-0.12.3
• 0.12.3
• mrgn/model-updates
• 0.12.4
• rdilip-tf-dockerfile
• mrgn/model-metadata
• 0.12.5
• mrgn/tracking-models
• mrgn/tracking-notebooks
• mrgn/0.12.6
• 0.12.6
• mrgn/dataloader
• mrgn/applications
• 0.12.7
• mly/spots-datasets
• 0.12.8
• 0.12.9
• mly/spotnet_v1_1
• tracking-augmentation
• lstm-bugfix
• caliban-paper-updates
• 0.12.10

Build # 1605

Build Type

push

travis-ci-com

Committed by willgraf

Commit Message

update hashes for ground truth tracking benchmark data with fixed gt

Run Details

21342 of 29500 relevant lines covered (72.35%)

4.32 hits per line