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pirl-unc / tcrsift / 28811903208
85%

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DEFAULT BRANCH: main
Ran 06 Jul 2026 05:56PM UTC
Jobs 1
Files 48
Run time 1min
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06 Jul 2026 05:52PM UTC coverage: 84.827% (+0.08%) from 84.744%
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3.3.0: AnnData atlas plots — UMAP, provenance, signature-vs-background, raincloud (#323)

First AnnData-input plots.py members over the single-cell atlas (embed → annotate): plot_umap (categorical phenotype/leiden + continuous signature/gene), plot_provenance (subset over grey bg, by=antigen), plot_signature_vs_background (per-lineage boxes + subset dots), plot_raincloud (half-violin + dots + median/IQR). Reuse save_figure/pretty_antigen. cmd_run emits phenotype+leiden atlas UMAPs. Closes #308, #315.

12551 of 14796 relevant lines covered (84.83%)

0.85 hits per line

Coverage Regressions

Lines Coverage ∆ File
186
83.38
1.08% plots.py
169
65.46
-0.16% cli.py
Jobs
ID Job ID Ran Files Coverage
1 python-3.12 - 28811903208.1 06 Jul 2026 05:56PM UTC 48
84.83
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Source Files on build 28811903208
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