27221838076
80%

Ran 09 Jun 2026 04:58PM UTC

Jobs 1

Files 29

Run time 1min

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Committed 09 Jun 2026 04:50PM UTC coverage: 80.322% (-0.01%) from 80.335%

Build # 27221838076

Build Type

push

github

Committed by

web-flow

Commit Message

v1.34.6: per-PMID source-organism curation for animal self-peptidomes (#307) (#311)

Adds a source_organism: key to pmid_overrides.yaml entries; the scanner fills
source_organism/species from it ONLY where the row is blank/'unidentified'.
Curated per-paper (verified self-peptidome, not a heuristic):
- 33460454 Tasmanian devil B2M-IP immunopeptidome -> Sarcophilus harrisii (2276 rows)
- 28188227 HLA-B27 transgenic-rat peptidome -> Rattus norvegicus (12494 rows)
Deliberately NOT curated: 35296092 (pig SLA-I) and 34535575 (possum) are
random-peptide-library refolding assays (synthetic source) — verification
caught that a blanket source=host rule would have mislabeled them.

Coverage Stats

5294 of 6591 relevant lines covered (80.32%)

0.8 hits per line

Coverage Regressions

Lines	Coverage	∆	File
46	91.9	-0.15%	curation.py
9	80.69	-0.85%	scanner.py

Jobs

ID	Job ID	Ran	Files	Coverage
1	27221838076.1	09 Jun 2026 04:58PM UTC	29	80.32	GitHub Action Run

pirl-unc / hitlist / 27221838076
80%

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pirl-unc / hitlist / 27221838076 80%

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