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pirl-unc / hitlist / 25031126243
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Build:
DEFAULT BRANCH: main
Ran 28 Apr 2026 02:49AM UTC
Jobs 1
Files 24
Run time 1min
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28 Apr 2026 02:46AM UTC coverage: 62.193% (+1.0%) from 61.194%
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v1.26.0: Add `hitlist build` top-level group (CLI refactor PR 2) (#168)

Promotes the three artifact-building commands out of `data` into a
canonical `build` namespace whose name matches what they do:

- `hitlist build observations`  ← was `hitlist data build`
- `hitlist build index`         ← was `hitlist data index`
- `hitlist build proteomes`     ← was `hitlist data fetch-proteomes`

`data` now stays focused on its actual job: registering, fetching, and
inspecting external dataset *inputs*.

The legacy paths still parse and run identically (handlers shared via
extracted `_add_build_*_args` helpers so flags can never drift), but
emit a stderr deprecation notice on every invocation pointing at the
new path.  Will be removed in v2.0.

Tests:
- 6 new tests under tests/test_cli_build_group.py
  - argparse routes new paths into Namespace correctly
  - legacy and canonical produce identical flag-derived attributes
  - legacy invocation prints deprecation notice + still calls handler
  - dispatcher reaches the same handlers from either entry point

2757 of 4433 relevant lines covered (62.19%)

0.62 hits per line

Coverage Regressions

Lines Coverage ∆ File
184
26.87
11.02% cli.py
Jobs
ID Job ID Ran Files Coverage
1 25031126243.1 28 Apr 2026 02:49AM UTC 24
62.19
GitHub Action Run
Source Files on build 25031126243
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Coverage ∆ File Lines Relevant Covered Missed Hits/Line
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