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pirl-unc / hitlist / 24794356354
80%

Build:
DEFAULT BRANCH: main
Ran 22 Apr 2026 06:05PM UTC
Jobs 1
Files 21
Run time 1min
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22 Apr 2026 06:03PM UTC coverage: 50.137% (+0.2%) from 49.969%
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v1.15.3: Drop implausibly short MHC-II rows at build time (#122) (#125)

MHC-II binding requires ~12-25 aa peptides; 8-11 aa rows labeled
mhc_class="II" are overwhelmingly IEDB import errors (e.g. HLA Ligand
Atlas PMID 33858848 attributing class-I elutions to the class-II
bucket). Adds `_drop_short_mhc2_rows()` helper called after the MS
and binding frames are assembled. Logs the drop count + top-5 PMIDs
affected so the curator can audit. Current data: ~119K rows dropped
across many PMIDs, led by HLA Ligand Atlas (55K) and PMID 37301199
(18K). Fixes #122.

1643 of 3277 relevant lines covered (50.14%)

0.5 hits per line

Coverage Regressions

Lines Coverage ∆ File
131
51.21
1.11% builder.py
Jobs
ID Job ID Ran Files Coverage
1 24794356354.1 22 Apr 2026 06:05PM UTC 21
50.14
GitHub Action Run
Source Files on build 24794356354
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  • Coverage Changed 1
Coverage ∆ File Lines Relevant Covered Missed Hits/Line
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