24614510768
80%

Ran 18 Apr 2026 09:42PM UTC

Jobs 1

Files 19

Run time 1min

Badge

Embed ▾

Committed 18 Apr 2026 09:41PM UTC coverage: 43.91%. Remained the same

Build # 24614510768

Build Type

push

github

Committed by

web-flow

Commit Message

v1.10.3: Improve Sarango 2022 precision — DR allele + full siRNA panel (#70) (#77)

Closes #70. The entry for PMID 36215666 was imprecise in two ways:

1. Only class I alleles were listed in `mhc` (HLA-A*68:02, B*15:03, C*12:03)
   even though `mhc_class: "I+II"` — paper-verified the class II allele is
   HLA-DRB1*01:02 (the primary DR allele driven by CIITA). Added to both
   ms_samples entries.
2. Perturbations only listed T6BP siRNA. Paper uses a broader panel:
   NDP52, OPTN, T6BP (+ p62, CANX in follow-up). Expanded the list.

Note rewritten to document both class I (W6/32 IP) and class II (TÜ39 IP)
immunoprecipitations, and to clarify that IEDB's "healthy cervix" is
misleading for disease state (HeLa is cancer) but otherwise consistent
(cervical, HeLa — paper-verified).

Core classification unchanged; this PR improves metadata completeness.

Added regression test test_ms_samples_sarango_2022_dr_allele.

Coverage Stats

1233 of 2808 relevant lines covered (43.91%)

0.44 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	24614510768.1	18 Apr 2026 09:42PM UTC	19	43.91	GitHub Action Run

pirl-unc / hitlist / 24614510768
80%

README BADGES
x

Markdown

Textile

RDoc

HTML

Rst

Jobs

Source Files on build 24614510768

pirl-unc / hitlist / 24614510768 80%

README BADGES x

Markdown

Textile

RDoc

HTML

Rst

Jobs

Source Files on build 24614510768

pirl-unc / hitlist / 24614510768
80%

README BADGES
x