24033791444
80%

Ran 06 Apr 2026 01:32PM UTC

Jobs 1

Files 11

Run time 1min

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Committed 06 Apr 2026 01:31PM UTC coverage: 37.713% (-0.2%) from 37.903%

Build # 24033791444

Build Type

push

github

Committed by

iskandr

Commit Message

Use mhcgnomes for all MHC species detection

human_only now uses mhcgnomes (via classify_mhc_species) to determine
species from the MHC restriction annotation instead of string-matching
the host field. This correctly filters out H2-Kb/H2-Dq rows that were
slipping through as "human" due to human host annotations on mouse MHC
transfection studies.

hla_only is now a legacy fallback that only applies when both human_only
and mhc_species are off.

Requires mhcgnomes >= 3.20.0 (fixes "MHC I" parsing as MhcClass).

Coverage Stats

376 of 997 relevant lines covered (37.71%)

0.38 hits per line

Coverage Regressions

Lines	Coverage	∆	File
27	21.95	-0.93%	scanner.py

Jobs

ID	Job ID	Ran	Files	Coverage
1	24033791444.1	06 Apr 2026 01:32PM UTC	11	37.71	GitHub Action Run

pirl-unc / hitlist / 24033791444
80%

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